Fragaria vesca (woodland strawberry): 101312636
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Entry
101312636 CDS
T02666
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101312636
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101312636
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
WDR55
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
TRM82_WD
Beta-prop_RIG_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_HPS5
TPR_8
Beta-prop_VPS8
Beta-prop_WDR41
TPR_2
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
101312636
NCBI-ProteinID:
XP_004299706
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Position
LG5:complement(12466528..12476388)
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AA seq
762 aa
AA seq
DB search
MEALPFHDGNIHDLIESRYLDVRQDVNHSLQMHSSLVRRLSQETELEGHQGCVNSIAWNS
RGSLLISGSDDTRINIWSYSGRKLLHSIETGHCANIFCTKFIPETSDELVVSGAGDAEVR
LFNLSQLSGRGPEDNAVPPSALYQCHSRRVKKLAVEVGNPNVVWSASEDGTLRQHDFREG
TSCPPAGSAHQECRNVLLDLRSGAKKSLADPPKQTFALKSCDISSTRPHLLLVGGSDAFA
RLYDRRMLPPLTSCRKRTSPPPCVNYFCPMHLSDRGRTSLHLTHVAFSPDGEEVLLSYSG
EHVYLMNVNNAGGSAVQYTSGDASKIMSFTPILNGLELQQPASRVSTSRLPKRRKATAMH
EKCSKLTQIALKSLEEGDFYHGIEACNEVLDGYGRDIGPILRHDCFCTRAALLLKRNWKN
DAHMAIRDCYNARKIDSSSFRAHCHMSKALSQLGKHKEALEFAMAAQSLAPSNPEVAAQL
ESIKRELAAAVSEKNGKASDGAPRSEPRGGRVLSLSDILYRSEGNSEASQDGPRSEREDS
DYDEELELDFETSISGDEEQDIEPNILHGSVNLRIHRRSDSSREVEGANGCCGSLSSSSQ
NERLQYQPEAVIDMKQRYVGHCNVGTDIKQASFLGQRGEYIASGSDDGRWFIWEKRTGRL
IKMLQGDEAVVNCVQCHPSDCVVATSGIDNTIKLWTPSASVPSIVAGGAAGPETANVSNV
LAANQHRLSHNRETILHSEILEHFRMHEFTEGSLHPFECAQS
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggaggccttgccttttcacgacggcaacatccacgacttgatcgagagccggtacctc
gacgtccgtcaagatgttaatcacagcttgcagatgcactcgtctttggtacggcggctt
tcgcaggagacggaattggaggggcatcagggttgtgttaattcgattgcttggaattct
agaggttcacttttgatatctggatcagacgatacacggataaatatctggagctattct
ggtcggaagcttttgcattctattgagactgggcactgcgcaaacatattttgtacaaaa
tttattcctgaaacttctgatgagcttgtcgtctctggtgctggggatgcagaagttcgg
ttatttaatttgtctcagttaagtgggagaggacctgaagataatgctgttcctccatca
gctctgtatcaatgtcactcaagaagagtcaagaagttagctgttgaagttgggaatccc
aatgtggtatggagtgcaagtgaagatggaactttgagacagcatgactttcgagagggc
acttcttgcccccctgctggatctgctcatcaagaatgtcgtaatgttttacttgacttg
cggtctggagcaaagaagtcactagctgatcctccgaaacaaacgtttgctctaaaatct
tgtgatatcagttccactaggcctcatttgcttttagttggtgggagtgatgcatttgct
cgtttatatgatagaaggatgcttcctcctctgacatcctgccggaaaaggacgtctcca
cctccttgtgttaactatttctgtccaatgcatctctctgatcgtggacgtacaagcttg
cacttaactcatgttgcatttagcccggatggagaagaggttctacttagttatagtggg
gagcatgtatatttgatgaacgtaaataatgccggtggaagtgctgtccagtatacttca
ggagatgcttcaaagataatgagcttcacacctatactgaatgggctagaactgcagcaa
ccagcatccagagtctccacaagtcgtctacctaaaagacgcaaggccactgctatgcat
gaaaagtgcagtaaactaactcaaattgctctgaagtccttggaggagggggatttttat
catggcattgaggcatgcaatgaggtgctggatggatatggtcgcgatattgggcccata
ctaaggcatgattgtttctgtactcgtgccgcattattgctgaagcgtaattggaaaaat
gatgctcatatggctataagggactgctataatgcccggaaaatcgatagctcctctttc
agagctcattgccatatgtctaaagctttatcacagttgggcaaacataaagaagctcta
gaattcgctatggcagcccaatctttagctccatcaaatcctgaggtagcagcacagttg
gagagtataaaaagagagcttgctgcagccgtgtctgaaaaaaatggtaaggcaagtgat
ggagcacccaggtctgaacctcggggtggaagagtactatcacttagtgacatactttac
cgatccgagggtaacagtgaagcttcacaagatgggcccagatctgaaagagaggattct
gattacgatgaggaattggagttggactttgaaacgtcaatctcaggtgatgaagagcaa
gatatcgagcccaacatcctacatggaagtgtaaatctgagaattcatcgaagaagtgat
tcttctagagaagttgaaggggcaaatggctgttgtggatcactgtcgtcatcatctcaa
aatgaaagactccaatatcagcccgaggcagttattgatatgaaacagagatatgtcggt
cattgtaacgttggaactgacataaaacaagcgagctttcttggccagagaggtgaatat
atcgctagtggaagtgatgatggcagatggtttatatgggagaaacgaactggcagactg
ataaaaatgcttcaaggagatgaagctgttgtgaactgtgtacagtgtcatccctctgat
tgtgtcgtggcaactagtgggattgacaatacaataaagttatggaccccaagtgcttca
gtcccatctattgtagctggtggagccgctggaccagaaactgctaatgtttctaatgtt
ttggctgctaatcagcacagattgagccataatcgtgaaactatcctccattctgaaatt
ttggagcattttcgaatgcatgagttcactgaaggaagcttgcacccgtttgagtgtgct
cagagctaa
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