Fragaria vesca (woodland strawberry): 101312886
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Entry
101312886 CDS
T02666
Name
(RefSeq) peroxisome biogenesis protein 6
KO
K13339
peroxin-6
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101312886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101312886
Membrane trafficking [BR:
fve04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
101312886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_5
AAA_22
RuvB_N
AAA_lid_3
nSTAND3
DUF815
AAA_17
TsaE
RNA_helicase
NPHP3_N
AAA_18
Rad17
AAA_7
AAA_14
AAA_28
ATPase_2
AAA_33
Parvo_NS1
TIP49
ATPase
Mg_chelatase
AAA_25
AAA_24
IstB_IS21
Vps4_C
PhoH
AAA_2
MCM
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
101312886
NCBI-ProteinID:
XP_004309704
LinkDB
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Position
Un
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AA seq
928 aa
AA seq
DB search
MVGRRKPLVLTSTKTLIKSLLSSPPGGLTSGDDHPLSASDDVTTSFQLLPPGILRFYVDR
SPKSASLDDSALVGLSTSLLKRLYITSGSLVLVKNMETNIQRIAQVIVVDPPDRSENTEL
SAGQSSHAMLVLPCCTLPGNGHMLLDQEVAYMSPMLAFNIDLHTLCLKSLVHRGEAALAS
YFGDGVDDEASGKGIGGSVIGIQPHLELPRYASHLRASFVKVPECGSLDSLRGNSAVEHE
DRQEMIDSALHSYFEVDRYLARGDVFSVCIKWNCKSMVCVPCDQSLENGVDNTIYFKVVA
MEPLDKPILRVNRSQTALVLGGSVSSAVPPDLLIAGQKGFVPLQGDTVKMLASILTPLLC
PSALSSKFRVSVLLYGLAGCGKRTVIRYVARRLGLHVVEYSCHNLTTSSEKKISVALAQT
LNAAQRYSPTILLLRHFDVFRNLQEGSPNDQVGITSEVASLIREFTEPIFDSGDMEQKQN
GHTDSGKVGRHQVLLIAAADSSEGLPPTIRRCFSHEISMGPLTEEQRVKMVSESLQKASE
FLSNTDSEDLIKDIVAQTSGFMPRDICALVADAGANLIPKGNAQIDTVKSEESDASLKDY
VESDSKSCEVTSPILGKESLTKALDRSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILD
TVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYI
GESEKNIRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLND
STQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVVSDPSYRERVLKALTRKFKLHEDVS
LYSIAKKCPPTFTGADMYALCADAWFSAAKRKVLSSDSDSSSIDDQPDSVIVEYDDFVKV
LKELSPSLSTAELRKYELLRDQFEGSSK
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggtggggaggaggaagccactagtactcacttccactaaaactctcatcaaatcccta
ctctcttccccgccgggaggcctcacctccggcgacgatcacccactctccgcctccgat
gacgtcaccaccagcttccagctgcttccgccgggaattctccgattctacgtcgaccgg
agccccaaatcggcttctctcgacgactctgctctcgtcggcctctccacttctctcctc
aaacgcctctacatcacctccggctccctggtgcttgtgaagaatatggagacaaacata
caaagaattgctcaggtcattgttgtggatccaccggaccgctccgagaacactgaacta
tctgctggccagtcttcccacgcaatgcttgttctgccttgttgcactttgcctggaaat
ggccacatgttgttagatcaggaagttgcgtatatgtcgcctatgttggcgtttaacatt
gacttgcatacattgtgcttgaaatcgcttgttcacagaggggaagcggcgttggcgtct
tattttggggatggggtggatgatgaggcgagtgggaaagggattgggggttctgtgatt
gggatacagccgcatttggagttgccgagatatgcttcgcacttgagggcttcgtttgtg
aaggtaccggaatgtggtagtcttgactctcttagagggaattcggctgttgaacatgaa
gatcgtcaagaaatgatagattcggcactgcatagctactttgaggttgataggtatcta
gcaagaggtgatgttttcagtgtttgtataaagtggaattgcaagtcaatggtttgcgtt
ccttgcgaccaaagtttggaaaatggggttgataacactatctatttcaaggttgtggct
atggaacctttggacaaaccaattctccgagttaaccgttctcaaactgcccttgtgctt
ggaggaagcgtctcttctgctgtgccccctgatttattgattgctggacaaaaaggtttt
gtacctttgcaaggggacacagtgaaaatgttggcctccatacttactccgcttctgtgc
ccctcagcactatcctcaaaattcagagtttctgtcctattgtatggattggcaggatgt
gggaagagaacggttattagatatgttgctcgtcgattgggcctgcatgtagttgaatat
agctgtcataatctgacgacgtcatctgaaaaaaagatttctgttgcactagcccaaacc
ttgaatgctgctcaaagatactcgccaactatacttcttctccgccattttgatgttttc
cggaatttgcaagaaggttcaccaaatgatcaagttggcatcacttctgaagttgcatca
cttataagggaattcactgagccaatttttgattctggagatatggaacaaaaacaaaat
ggtcatactgattctgggaaagtaggtaggcatcaagtgctgttaattgcagctgctgac
agttcagaaggtctaccgccaactattagacgttgctttagccatgaaataagtatgggt
ccattgactgaagaacaaagggttaaaatggtctcagagtctttgcagaaggcttccgaa
ttcctttctaatactgattcggaggatcttataaaggatatagttgcacagacatctggt
ttcatgcccagagatatctgtgcattggttgctgatgctggtgcaaacttgattccaaaa
ggcaatgctcagattgacacagtgaagtctgaagaatcagatgcttctctcaaagattat
gtcgaatcagacagtaagtcctgtgaagtcacatctccgattctgggaaaagaaagcttg
acaaaagcattggacagatcaaagaaaaggaatgcatcagcccttggtactccaaaggtt
cctaacgtcaaatgggaagatgttggtggtcttgaggatgtgaagaaatcaatcctggat
actgtacagttacctcttctgcacaaggacttgttttcatctggcttacgaaagcgttct
ggtgttctactgtatggtccaccgggaacagggaaaactctgctggcaaaagctgttgca
actgagtgctccctaaattttctcagtgtaaaaggacctgaactcattaatatgtacata
ggagagtcagaaaagaatatcagagacattttccagaaggctagatcagcacgcccatgt
gttatattttttgatgaacttgattcccttgctccagcccgaggtgcatctggggattct
gggggtgtcatggacagagtggtttctcagatgcttgcagagattgatggcctaaatgat
tcaactcaggacttgtttataattggagcaagtaacagaccagatctaattgacccagca
cttctacggcctggccggtttgataagttgctttatgttggagttgtgtctgatccatct
tacagagaacgggttctcaaagctcttacccgaaagtttaagttacatgaagatgtttca
ctttattcaatagcgaagaaatgtccaccaaccttcactggtgcagacatgtatgccttg
tgtgcggatgcttggtttagtgcagctaagcgtaaggttttgagttcagattcagattcc
tcttccatagatgaccaacctgactctgttattgttgaatatgatgattttgtcaaggtc
ttaaaggagctatcgccctcactctccacagccgagcttaggaagtatgagctgctgcga
gatcagtttgaaggttcttccaaatga
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