Fragaria vesca (woodland strawberry): 101312949
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Entry
101312949 CDS
T02666
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101312949
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101312949
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101312949
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GFIT
Motif
Pfam:
cNMP_binding
Connexin
Motif
Other DBs
NCBI-GeneID:
101312949
NCBI-ProteinID:
XP_004305198
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Position
LG6:8927497..8930382
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AA seq
586 aa
AA seq
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MLVEMDEESVLPASMTGNSISKIEDKGQMTQVTEEMIDQLGVYQVDYSFWKIVQKLIYAP
FYLPWVLLAAIIYPEKPEYFIYSSFISMLLDPLFLYIPLINEETKCLMLDKKVMIAALIL
RVVTDLRYVVKIISKIKKWWPEMSKKIGITSNVLAILPVPQVVVLVFIPKMRGSGSLTIL
RFLNWLIFFQYLQRVYPIYRYCKNLNKEMRDKSSHMRAWIPSLVNLLIYLLASYVLGTFW
YYFSIQREIDCWEYACQREVGCEFSIHCSVNTFRNVTLLHTSCPINPPDPKMFDFGIFLY
ALQSGMQESTNLPQKVLLCFSWGLRNLSSFASNLNTSNYGWETLFVVAISISGLIFFIYF
LGHVQTFMQVAGKSEKSRQKLKILGPKVESMLLEYGFPADAKVLKDSINYVVEQKHSEEP
DLVLESMFSVFSFKHKVADPSLQRELNTIRITLFLEKLKKLDLLLGLHKYETVLKEICKH
LDPVIYPKGSYIVREKEPVDMMFFITQGIALSCTTDHSIPTRRLEKGDCYGEELLSWATT
ASTSFSDLPNSLHTVKAHKTVELFALQAADLQRVFSQPSIHSSRFT
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgctagtagagatggatgaagaatctgttctccctgcaagtatgacgggaaattcgatt
tcaaagattgaagataagggccaaatgacccaggttacagaggagatgatagatcagtta
ggtgtgtaccaagtcgactattctttctggaaaatagttcagaaacttatatatgcacct
ttctatctcccatgggtgttgctggcagcaataatatacccggaaaagcctgaatatttt
atctactccagttttatctctatgttacttgatcctttgtttctgtacattcctcttatc
aacgaggaaaccaagtgcctcatgttggacaagaaagtgatgatagcagctctgattctg
cgagtcgtcacagatcttcgttatgttgttaaaataatttctaagattaagaaatggtgg
ccggaaatgtctaagaaaataggcatcaccagcaacgtgctcgctattcttcctgttcca
caagtagtggttttagttttcattccaaaaatgaggggctctggatcattgaccatactg
cggtttttgaactggcttatttttttccaatacctgcaacgagtttatcctatctacaga
tactgtaagaatctgaacaaggagatgcgtgacaagagtagtcatatgcgggcatggatt
ccaagtttagtcaatcttctaatatacctccttgccagttatgtactagggacgttttgg
tattatttctctatccaacgagagattgattgttgggaatatgcttgccaaagagaagtg
ggatgtgagttcagtatacattgcagtgtcaacacattcagaaatgttacattgctacat
acttcatgccctataaatccaccggatccaaaaatgttcgatttcggtatatttctttat
gcacttcaatctggtatgcaagaatcaacaaatttaccgcaaaaagtcttactttgtttc
tcgtggggattacgaaatctgagttcttttgcttcaaacctcaacactagtaactacggt
tgggaaaccctatttgtggttgctatctctataagcggcttgatattttttatatatttc
ctcggacatgtgcagacatttatgcaggtagctgggaaatcagaaaagtcccgccaaaag
ttgaagattttgggaccaaaagtagaatccatgttacttgaatatggcttccctgctgat
gcgaaagtcctgaaggatagcatcaactatgtggtagaacaaaagcactcagaagaacca
gatctcgttttggagagtatgttttcagttttttccttcaagcataaggtagctgaccca
agtctacaacgtgaactgaatacgatcagaataactctattcttggagaagttaaagaaa
ctcgatcttcttttggggcttcacaagtacgaaacggtgttaaaggaaatttgtaagcac
cttgatccagtgatctatcccaaaggaagctatattgttcgagagaaggagcctgttgat
atgatgttcttcatcacccagggcattgcactctcctgcaccactgaccactcaatcccc
actaggcgtcttgagaaaggagattgttacggtgaagagcttctaagctgggcaacaacg
gcatcaacctccttctccgacttacctaactcactccatactgtcaaggcccataaaact
gtcgaactctttgccctccaagctgccgatttacagagggttttctctcagccatcaatc
cattccagccgatttacctag
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