Fragaria vesca (woodland strawberry): 101313015
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Entry
101313015 CDS
T02666
Name
(RefSeq) probable beta-1,3-galactosyltransferase 19
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
fve01003
]
101313015
Glycosyltransferases [BR:
fve01003
]
O-Glycan biosynthesis
O-linked Gal type
101313015
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Motif
Other DBs
NCBI-GeneID:
101313015
NCBI-ProteinID:
XP_004298603
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Position
LG4:22293468..22296626
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AA seq
647 aa
AA seq
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MKRRKFDPVSLSHTRLRLLQMLMATLLVYFLITSFDTHWDSGDENDAPFELLSDTSLPTQ
GPLRDSPRIMRESKRVSGLVFEEKKKKKKTGFDGNASKAGGVHALHEAAVEAWRAGKKLW
AEIESGKVELDNNNKYENRSDPCPHSFSVSGSEFRARNRVMVIPCGLTLWSHVTVVGTPR
WAHPEYDPKIAVLKEGAGALMVSQFMMELQGLKNVEGEDPPRILHFNPRLKGDWSNKPVI
EQNTCYRMQWGLSLRCEGWRSRADEETVDGQVKCEKWIRDDDDQSEESKAIWWLNRLIGR
TKKATVDWPYPFVEGRMFVLTLSAGLEGYHISVDGRHVTSFPYRTGFVLEDATGLYVNGD
VDVHSVFAASLPTSHPSFAPQMHLEMVTKWKAPPLPYGRVELFLGILSAGNHFAERMAVR
KSWMQHKLVKSSRVVARFFVALHGRKEVNVELMKEVEYFGDIVIVPYMDNYDLVVLKTIA
ICEYGVRTAPAKYIMKCDDDTFVRVDAVLKEARKARKHRSLYIGNLNYHHKPLRFGKWAV
TYEEWPEEDYPTYANGPGYIISSDVAKFILSEFEKNKLRLFKMEDVSMGMWVEQFNNSRP
VKYVHSLKFCQHGCIEDYYTAHYQSPRQMICMWGKLQDGKPQCCNMR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacgcaagttcgacccagtgtcgctgtcccacactcgcctcagattgcttcaa
atgctaatggccacactcttggtttacttcctaattaccagcttcgacacccactgggat
tccggcgacgaaaacgacgccccgttcgagctgctcagcgacacgtcgttgcccacccaa
ggcccgctccgtgattccccgcggataatgcgggagtcaaagagagtctcgggtttggtc
ttcgaggagaagaagaagaagaagaagaccggttttgacggaaatgcgagtaaggcgggc
ggagttcacgcgcttcacgaggccgccgtggaggcgtggcgagctgggaagaagctctgg
gcagagatagagtccggaaaagttgagctagacaacaacaacaagtacgagaaccggtcc
gacccgtgcccgcattcgttttcggtgtccgggtccgagtttcgcgcccggaaccgggtg
atggtgatcccgtgtggactgacgctgtggtcgcatgtgacggtggtggggacgccgcgg
tgggcccacccggaatatgatccgaagattgcggtgttgaaggagggagctggggcgttg
atggtgtcgcagtttatgatggagctgcagggcttgaagaatgtggaaggggaggacccg
ccgcgaatattgcatttcaatccgagattgaagggggattggagtaacaagccggtcatc
gaacagaacacttgttaccgcatgcaatgggggttgtcgcttcgctgcgagggctggcgg
tcccgggctgatgaagaaaccgttgatggacaagtgaaatgtgagaagtggattcgtgac
gatgacgatcagtctgaagaatcgaaggccatatggtggttgaacaggctgataggaaga
acaaagaaggcgactgtagactggccgtacccttttgttgagggcaggatgtttgttctc
accttgagtgccggtttggaaggttaccatatcagcgttgatggtagacatgtcacttcc
ttcccttatcgcacgggatttgttctggaggatgccactggactgtatgtaaatggagat
gttgatgtgcactctgtctttgctgcctccttacctacatcacatcctagtttcgctcca
cagatgcatcttgagatggttactaaatggaaagctccacctcttccctatgggcgtgtg
gagttgttccttggcattctttcggctggcaaccattttgctgagcggatggctgtgagg
aagtcttggatgcagcataagttagtcaagtcttcacgagttgttgcacgtttttttgta
gcattgcatggtagaaaggaagtaaacgtggagctaatgaaagaagtagagtattttggt
gacattgttatagttccttacatggataactatgatcttgtagtactgaagactatagca
atttgtgaatatggggttcgaacagcgcctgcaaagtatatcatgaaatgcgatgatgac
acctttgtccgggtggatgctgtgctcaaggaagcacgaaaagcgcgtaaacatagaagc
ctatatataggaaatttgaactaccaccacaagcctcttcgttttggtaaatgggcagtg
acatatgaggaatggccagaagaagattatccaacctatgcaaatggtccaggatacatt
atctcctccgatgtagcaaaattcatcctatctgagtttgaaaagaacaagttgcgattg
ttcaagatggaagatgtgagcatgggaatgtgggtggagcagttcaacaattctagacca
gtgaagtatgtgcacagtttgaagttctgccaacatgggtgcattgaagactattacact
gcacactaccaatccccaaggcagatgatatgcatgtggggaaaattgcaggacgggaaa
ccccaatgctgcaatatgagatga
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