Fragaria vesca (woodland strawberry): 101313103
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Entry
101313103 CDS
T02666
Name
(RefSeq) coiled-coil domain-containing protein 132
KO
K23288
syndetin
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101313103
Membrane trafficking [BR:
fve04131
]
Protein recycling
Others
EARP complex
101313103
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
101313103
NCBI-ProteinID:
XP_011462044
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Position
LG3:9294913..9311136
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AA seq
1103 aa
AA seq
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MQPNLTPFGNPFLLNGDLSGDGFQTPPASVLFLVPFLLFQGGSGMDLFKVGEKILSSVRS
ARSLGLLPPASDRPEVPARAAAAAVVARAIAGLPPHQRYGLSSSSEELSSIYASRQQHGE
EVEEIEEVFYEEDFDPVRHILDQAALKLAQLDRVSEDLSRNVMEHHEVMVKGMHLVRELE
KDLKVANVICMNGRRHLTSSINEVSRDLIVNSNSKKKCALLDMVPVLTELRHALEMQSKL
ESLVEEGNYCRAFQVLSEYLQLLDSFSELSAVQEMSRGVEVWLGQTLQKLDSLLLGVCQK
FKEEGYITVVDAYALIGDTSGLAEKIQSFFMQEVLSETHSVLKTIVQEDQEVQMQNNRLT
YSDLCLQIPEPKFRQCLLNTLAILFKLMCSYHEIMAFQLDDKDLAEKTSSIVPKESDISQ
IPGGVQNISTSFSSVKVNGSPSGCVDEMESTSSVEESHTNCFTEPTGNTTSVCTTSHDLV
DEARMDGTAASTSGSPWYQLRKDATAFVSQTLQRGRKNLWHLTTTRVSVLLSSASVSSAS
IHQFLKNYEDLSVFILAGEAFCGIEAADLRQKLKAVCESYFLAFHRQNIYALKMVLEKEL
WLVIPPDTVQDITFPGLVGDGAPLIAPSDSKSRVLSEKSARLVDTGVKKSGFSIWLKNGN
PFVLKLPHSSKEGLKGNGTASGEFDGNLSESDKVSPRKSDANHSNGANSVSEDENEDLLA
DFIDEDSQLPSRISKPKNPRNRSSHLGAGELIAQTGSSICLLRSMDKYARLMQKLEIVNM
EFFKGICQLFEVFFHFVYETFARQNTNSGGKGSSDPINYRLKTALSRIQQNCDQWMKPLS
SSPTSFSSPFTHSDITPMSPTSTNFGSTPGTSFGLKERCAAADTLTLVARMLHRSKAHLQ
RMLFQKNAAVVEDFYVNLVDAVPDLIEHIHRTTARLLLHINGYVDRIANAKWEVKELGLE
HNGYVDLLLGEFKHYKTRLAHGGIRKEVQDLLLEYGVEIVANTLVEGLSRVKRCSDEGRA
LMSLDLQVLINGLQHFVSMNVKPQLQIVEGFIKAYYLPETEYVHWARAHPEYTKNQIVGL
INLVASMKGWKRKTRLEVLEKIE
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaatctgacccccttcggcaatccgtttttgttgaacggcgatttgagcggc
gacggcttccagactcctccggcgagcgtcttgttcttggtgccgtttctgttgttccaa
ggaggaagcggaatggatttgttcaaggtcggcgagaagattctcagctccgtcaggtct
gctagatcacttggtcttcttcctcccgcttctgatcgtccggaggttccggcgcgagct
gcagcagctgcagttgttgcacgtgctattgcaggactgcctccacatcaaagatatggt
ctctcttcaagctctgaagaattgagctcaatttatgcgagcagacagcagcatggtgaa
gaagtggaggagatagaggaagtgttctatgaagaggattttgatccagttagacatatt
ttggatcaggcagctcttaaattagcacaactggatagagtatcagaagatttatcccga
aatgttatggaacatcatgaagtaatggtgaaggggatgcatttggtcagggaattggag
aaagacttaaaagttgcgaatgtcatttgcatgaatggaagacggcatcttacttcgtcg
ataaatgaggtttctagggatctgatagtaaattccaattccaagaagaaatgtgctctt
ctggacatggttcctgttttgactgagcttcgccatgcattagaaatgcaatccaaactt
gagtctcttgttgaggaaggaaattactgcagggcctttcaagtattgtctgagtatctg
cagctattagatagtttctcagaactatctgcagtacaagagatgagccgtggagttgag
gtttggctgggacaaactcttcagaagctggattccttgttgctaggcgtgtgccagaaa
ttcaaagaggagggctatataactgtggtcgatgcttatgctctaattggggacacttct
ggtcttgctgagaagatacaaagtttctttatgcaggaagttctctcagaaacccattct
gtattgaagaccattgtgcaagaggatcaggaagtacaaatgcaaaataatcgacttacc
tacagtgatctatgccttcagatacctgaacctaagtttaggcagtgtttgttaaatact
ctagctattcttttcaaattgatgtgctcatatcatgaaatcatggcctttcaactggat
gataaggatttggctgaaaaaacttcaagcattgtgccaaaggaaagtgacatctctcaa
attccaggaggggttcagaacatttcaacgtctttctcttctgtaaaagttaatggctct
ccttcgggatgtgtagatgaaatggaaagtacatcttctgtagaggaatctcataccaac
tgtttcactgagcctacgggaaacacgacttccgtctgtacaacatctcatgatttagta
gatgaggctaggatggatggcactgcagcgtcaacaagtgggtctccttggtatcaacta
cggaaagatgccactgcatttgtttcccaaacccttcaaagaggacgcaaaaatctgtgg
catctcacaactactcgcgtatcagtcttactttcttctgcttctgtatcttctgctagc
attcaccaattcttgaaaaattatgaagatctgagcgtgttcatcttggctggggaagca
ttttgcggaattgaagcagctgacctcaggcagaagttgaaggcagtttgtgaaagttac
tttttagcttttcatcggcaaaatatctatgcgctcaaaatggtcttagaaaaagaactt
tggttagtcattccacctgatacagtacaagatattacctttcctgggcttgttggtgat
ggagcacctttaattgctccatctgatagtaagtccagggtactatctgagaagtctgca
agattggttgatactggtgtcaagaagagtgggttttccatttggctaaaaaatggaaac
ccttttgtgttaaaacttccacactcatccaaagaaggtctgaaagggaatggtacggct
tctggtgaatttgatggaaatttgagtgaaagtgacaaggtctctccacggaagagtgat
gcaaatcattcgaatggtgctaattctgtttccgaagacgaaaatgaggaccttcttgca
gattttattgatgaggatagtcaactccccagtcgaatttcaaaacccaaaaacccgaga
aaccgatcttcacacttgggtgctggagagctgatagcccagacaggatcatctatttgc
cttctaaggtcaatggataaatatgccaggctaatgcagaaattagaaatagtgaacatg
gagttcttcaaggggatatgccagctgtttgaggtattctttcattttgtatatgaaaca
tttgctcggcaaaacaccaattctggtggaaaaggctcatccgaccccattaattatcgc
ctgaagacagcattgtcaagaatacaacaaaattgtgaccaatggatgaagcccttgtca
tcttcccccacatctttcagttcaccatttacacactctgatatcacacctatgagtcct
accagtacaaattttggtagcacacctggaacatcttttggtctcaaggaaagatgtgca
gctgctgatactctcactcttgttgctcgaatgttgcatagatccaaggctcatctccag
agaatgctttttcaaaaaaatgctgctgttgttgaagatttctatgtgaatttggtggat
gctgtaccagatcttatagagcatattcataggacgactgcaagactgctcctccatatt
aacgggtatgttgatcggattgccaatgcaaaatgggaagtgaaagaacttggacttgaa
cataatgggtacgttgacttgttgttgggagaatttaagcactacaaaacaaggcttgct
catgggggaatccggaaggaggttcaagatctcctcttagaatatggagtggaaattgtt
gccaatactcttgtagaaggtctatcacgtgtcaagaggtgttctgatgaagggcgggct
ctcatgtcattggatcttcaggttttgatcaatgggctacaacattttgtctccatgaat
gttaagcctcagttgcaaatagttgagggcttcattaaggcatactatcttcctgaaact
gaatatgtgcactgggcacgagcacaccccgagtacacaaaaaatcaaattgttgggttg
atcaatctcgttgcctctatgaaaggttggaagagaaaaaccaggttggaagtactagaa
aagattgaatga
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