Fragaria vesca (woodland strawberry): 101313110
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Entry
101313110 CDS
T02666
Name
(RefSeq) ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
fve03110
]
101313110
Chaperones and folding catalysts [BR:
fve03110
]
Heat shock proteins
HSP100
101313110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
nSTAND3
TniB
AAA_14
AAA_18
NACHT
Zeta_toxin
AAA_28
Mg_chelatase
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
101313110
NCBI-ProteinID:
XP_004297496
LinkDB
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Position
LG4:19796710..19802377
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AA seq
922 aa
AA seq
DB search
MARVLVHSTNIPGLVAGQRLGQSKGSGNARRSTKMMCSLRTPALRISSFSGLRSVNALDI
MARPGQDLYSKVGVAISSRRRKASRCVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVG
VGAGQGTSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILRGLRERYEIHHKLRYTDEALISAAQLSYQYISDRFLP
DKAIDLIDEAGSRVRLRHAQLPEEARELDKELRQITKEKNEAVRSQDFEKAGELRDREMD
LKTQITAITEKGKEMSKAESEAGDVGPLVTEVDIQHIVASWTGIPVDKVSADESDRLLKM
EETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYY
FGSQEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKD
SSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKTKEI
ELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSD
GNVTVLNGNSGSAGSLPEPVPV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctagggttttggttcactctactaatattcctggtctggttgccgggcaaaggctt
ggtcaatctaaaggctctggaaatgctagaaggtcaacgaagatgatgtgctctttacga
actcctgctttgagaattagcagtttctcgggactccgtagtgttaatgcgttagatatc
atggcgaggcctgggcaagacttatattctaaggtgggagtagctatctcatcccggcgt
cgaaaggccagcagatgtgtgcctaaagctatgtttgagcgcttcacggaaaaggcaata
aaggttattatgcttgcacaagaggaagcaaggcgacttggtcacaacttcgttggtact
gagcagatactcttgggtcttattggtgaaggaactggaattgctgccaaggtccttaaa
tctatgggaatcaatcttaaagatgcacgcgttgaagtggaaaagatcattggaaggggc
agtggctttgttgctgttgaaatcccattcactcctcgtgcaaagcgagttctggaactg
tcgctggaggaagctcgccaactaggtcataactatattggatctgagcacttgcttctg
ggactgcttcgggaaggtgagggtgtggcagctcgtgttcttgagaatttaggtgctgac
cccagcaatattcgcacacaggttattcgtatggtgggtgagagcacagaagctgttggt
gttggagctggacagggaactagtggcaacaagatgccaactctagaggagtatggaacc
aatttgactaagctagcagaggagggaaagctggatcctgttgttggaagacaacctcaa
attgaacgcgttgtccaaattttgggcaggcgaacaaagaacaatccctgccttattgga
gagcctggcgttgggaagactgcaattgcagaaggtcttgctcaacgaattgcaagtggc
gatgtgcctgaaacaatagagggaaagaaggttatcactctggatatgggtcttcttgtt
gctggtactaaataccgtggagagtttgaggaaagattaaagaagctaatggaggaaatc
aaacaaagtgatgagataatcttgtttattgatgaggtgcacactctaattggagcagga
gcagcagaaggtgcaattgatgctgcaaatatattaaaaccagccctggcaagaggtgaa
ctgcagtgtattggagccaccactcttgatgaatacagaaaacacattgagaaagaccct
gcattggaaagacgttttcaacctgttaaagttcctgaaccaactgtggacgaaactata
cagattttgcgagggctccgggagcgatatgagattcaccacaaactccggtatactgat
gaagctctgatttctgctgcccagctatcataccagtacatcagtgatcgatttctacct
gataaagcaatcgacttgattgatgaagctggatctcgagttcgccttcgtcatgcacag
ctacctgaagaagctagagaacttgacaaggaactgagacagattaccaaggagaagaat
gaagctgtacggagccaagactttgaaaaggctggggagttgcgtgacagagaaatggac
cttaagacacagatcactgctataacagagaaaggcaaagagatgagcaaggctgagagt
gaggcaggggatgtaggacctttggtaaccgaggtggatattcaacatatcgtggcctct
tggacaggtattcctgtggacaaagtgtcagctgatgaatccgatcgcctcctcaagatg
gaagagaccctccatacgcgagttattggtcaggatgaagcagtcaaggctatcagtcgt
gctattcgccgagcccgtgttggactcaagaatcctaatcgtccaattgccagtttcatc
ttttctggtccaactggtgttggaaaatccgaactcgcaaaagctttggctgcatactac
tttggttctcaagaagccatgatccgtcttgatatgagtgaattcatggaaaggcacact
gtttcaaagcttattggttcacctcctggttatgttggttacactgagggaggtcagttg
actgaagctgttagacgccgtccttacactgtggtgctttttgatgagattgagaaggct
catccggatgtcttcaacatgatgcttcaaattcttgaggatggaagattgacagacagt
aagggcagaactgtagatttcaagaacacacttctgatcatgacttctaatgttggaagc
agtgtaattgagaaaggaggccgccgtataggatttgaccttgattacgatgagaaggac
agcagttacaatcgcatcaagagcttggtgacagaggagttgaaacagtactttagacca
gagttcctaaataggttggatgaaatgatcgtcttccgccagctcacaaagttagaggtg
aaggaaatagcagatataatgctgaaggaggtttttgaaaggctgaagactaaagagata
gagcttcaagtgacagagaggttcagagatagggtggttgatgaaggatacaatccaagc
tatggggcaaggcctctaagaagagctataatgagacttctggaggatagcatggctgag
aagatgctagcaagggagatcaaagagggtgactccgttattgtggatgtcgattctgat
gggaatgtaactgtgctcaatggtaacagtggttctgctggatctttgccagagcctgtt
cccgtttga
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