KEGG   Fragaria vesca (woodland strawberry): 101313160
Entry
101313160         CDS       T02666                                 
Name
(RefSeq) uncharacterized LOC101313160
  KO
K10756  replication factor C subunit 3/5
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03030  DNA replication
fve03410  Base excision repair
fve03420  Nucleotide excision repair
fve03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101313160
   03410 Base excision repair
    101313160
   03420 Nucleotide excision repair
    101313160
   03430 Mismatch repair
    101313160
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fve03032]
    101313160
   03036 Chromosome and associated proteins [BR:fve03036]
    101313160
   03400 DNA repair and recombination proteins [BR:fve03400]
    101313160
DNA replication proteins [BR:fve03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    101313160
  DNA Replication Termination Factors
   ELG1-RFC complex
    101313160
Chromosome and associated proteins [BR:fve03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    101313160
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     101313160
  Check point factors
   HRAD17(Rad24)-RFC complex
    101313160
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 TIP49
Other DBs
NCBI-GeneID: 101313160
NCBI-ProteinID: XP_004289134
LinkDB
Position
LG1:complement(9264754..9268231)
AA seq 781 aa
MENNWSRHSRTSQTSLKPRRSGYEPSDNETDFQDTPFYGHNRKISGGLEPEVTKAAGLEF
ARNISPLKHGRRHSSMFEYDASAARNDAVVSPVRRRTSKSPYKQRREDVTVRSPIAGSET
RRNISPLSKAERRRYVSPLKREKEGHDVNDADEIVNSNRKQSQRRAGRDPQSRRSATAPR
VRARSEVELQSNRDVTPTKGERRPSPLSQALVRTTPTVRERTPSPITKGLINKQRQHTKS
PSVGEINEMIANVELSKTPPKANGAPLAFGSSDSIAPGDIFFSRECKILALPKTVNPIPK
PKNVSGFENRLTMPNVKMVTQRGNGFDHNARGTPSSYGLSQTTPTTTTTSSALSRQSSKM
SGTSGSTTASAKKFTANRGKSESHSLFACMRKGGSCRKTKSPERSPVFNEASFIQKAYVV
QSLRQFWADKHQPASLNGFTSHKQEAQLLKDLVIDNKFPHILFTGPAGSGKKALTMAFLR
ETYGDASWDVSHDLRHFQIQEQMSMQVMVPLTSSAHHIELNVRVEANARYALMGLVKEIN
SENEIAPEVSTVHIKGNHKVLVLYDVDQAAEHIQHLIKWIMDCYSEAVKLILCCQNDDDI
VESVKNRCKVIKLEAPVTQEITEVLAQIARKENFDLPMSFANKIAHKSKQNLRKAIMGLE
ATKAHNYPFVDEQPVPIGWEEVLVEVAAEILADPSPKRLFFIRGKFQKLLVGFVHPKLIL
LKLVEQFLKAMDDTSKRDLYYWHAYYEKRLPEGASALLKLEEFVAKFMSIYRKSANSRQY
V
NT seq 2346 nt   +upstreamnt  +downstreamnt
atggagaataactggtcaagacatagtagaacttctcagacctcactgaagccccggcgc
agtggttatgaaccatctgataacgagactgatttccaagatacacccttttatggccac
aataggaagatcagtggaggcttggaacctgaagtgacaaaagctgcagggttggagttt
gcacgaaacatcagccctttgaagcacggccggaggcactcttcgatgtttgaatatgat
gcctctgctgcaagaaatgatgcagtagtaagccctgtccgaagaagaaccagcaaatca
ccatacaagcaaagaagagaagatgttacagttcgttcaccaatagcaggttctgaaact
cgcagaaatatcagtcccttgtcaaaagctgagcgcagaagatatgtttctcctttgaaa
cgagaaaaagaagggcatgatgtgaatgatgctgatgaaattgtgaactcaaacaggaaa
caaagccaaagaagggctggtagagacccccaaagcagaagatcagctacagccccaaga
gttcgagcaagatcagaagtcgaactacaaagcaaccgtgatgtaacaccaactaaaggt
gaaagaagaccatcaccattgtcacaggccctggttagaacaacaccaactgtaagggag
agaacaccatccccaatcacaaaagggttgatcaataaacaaagacaacacacaaaatcg
ccgtctgttggtgaaatcaatgagatgattgccaatgtagagctgtctaagactcctcca
aaggctaatggtgctccactagcttttggaagttcagattctattgcaccaggtgatatt
ttcttctctcgtgagtgcaaaatcttggcactccccaaaactgtcaatcccataccaaaa
ccaaagaatgtcagtggttttgagaaccgcttaactatgcctaatgtcaagatggtaact
caaagaggaaatggttttgatcataacgctcgagggactccatcgagctatggtttgtca
cagacaaccccaacaacaacaacaacaagctctgcattgagcaggcaaagcagtaagatg
agtggtacaagtgggagcacaactgcgagtgccaagaaattcacagcgaacagagggaaa
agtgaaagtcactcactgtttgcttgtatgagaaagggagggtcttgtcgaaaaacaaaa
tcacctgagcgttctcctgttttcaatgaagcttcattcattcagaaggcatatgtggtt
caaagtctaagacagttttgggctgataagcatcaaccggcttcattgaatggattcact
agccacaagcaagaagctcaacttctcaaggatctggtaattgacaataaatttcctcac
attttgtttaccggaccagctggttctgggaaaaaagctctaacaatggctttccttaga
gaaacatatggcgatgcaagctgggatgtatctcatgatttaagacacttccagattcag
gaacaaatgtcgatgcaagtaatggttccattgacatccagtgctcaccatatagagctc
aatgtgcgcgtggaagcaaatgctagatatgcattgatgggtttagtgaaggaaatcaac
agtgagaatgaaattgctcctgaagtcagcactgttcatatcaagggaaatcataaagtg
ctagttctttacgatgttgaccaagcagctgaacacattcagcatttgatcaaatggata
atggactgttactcagaagctgttaaactcattctctgctgccaaaatgatgatgacatt
gttgaatcagtgaaaaatcggtgcaaagttatcaagctcgaagctcctgtgactcaagaa
attacagaagttcttgctcagatagcaaggaaggaaaactttgacctacctatgagcttt
gctaataagattgctcacaaatctaagcagaacctgagaaaagcaatcatgggtcttgaa
gcaaccaaagcacacaattatccttttgtagatgagcaaccagttccaatcggatgggaa
gaggtacttgttgaagttgctgcagaaatcctagctgatccatcaccaaagaggttattc
ttcatccggggaaagtttcaaaagcttctcgtgggttttgtacatccgaaactgatttta
ctgaagctggtagaacagttcctgaaagcaatggatgatacttctaaaagggacttatat
tattggcatgcttactatgagaaaagactcccagaaggagcaagtgctttactcaaacta
gaagaatttgtggcgaagttcatgagcatataccgtaagagtgccaacagccgccagtat
gtataa

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