Fragaria vesca (woodland strawberry): 101313169
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Entry
101313169 CDS
T02666
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101313169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101313169
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101313169
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GFIT
Motif
Pfam:
cNMP_binding
Synaphin
Motif
Other DBs
NCBI-GeneID:
101313169
NCBI-ProteinID:
XP_011470214
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Position
LG7:21256980..21258765
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AA seq
655 aa
AA seq
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MAKHQGPNNEIQMSITPDVSHDFGSPEAHRKPTPEHGQPQASSQRWNWPTVAGVSSDLNP
WWNKILVTSCVIAVLFDPLFFYIPYTSEEKKCMGSDERVQTAALIFRSVTDITFLVHIIY
QLYVAIKFALSRVDESLVFRYESVSRVQMIRFAKAFSLKLSWRSFLTDVFAILPIPQLLI
VGLFFNIGGNDYLLRRKIVSGFLLVQYVPRIYRIYLSSVAITESALWVRGVFNLFLYILA
SHALGAFWYFFSIQRQTSCWHRTCIADLNRTESECTFYCDDSTAALITGTPQFNTTLDEQ
CVLKVPYNMTDPPFDFGIFFDALKNDIQGKINVPQKIGYCFWWGLRNLSNFGTSLTTSTY
LWENSFAILISIIGLLLFLYLIGNVQIYMERATTRADEVREKLRIKKNDIDDWIENNGIG
KDMKEEIMKNIKEKLEKDISADLDDIYSILPPNTRKVVKRFVGMRTLRNVPMLSEVDGRV
LKMMCDYLKPVKYQENTMVFKMGKPFDRMVFITDGSMWTYTTATDHQTSDSGKATSGGLV
TSSSTEAHFLEKGDAYGHMLLQLASSSFTTLPISDANVKCHTKVEAFVLMASDLRNIVTE
CGRCGRCGDLWPDFKYNASQDEEAVQKAPPGHFQQQQGPKKRGTTSNIHPTGYSG
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacatcagggaccaaacaatgaaatccaaatgagcattacaccagatgtgtct
catgatttcggtagtcctgaggctcatcgaaaaccgacacccgaacatggacaacctcaa
gcaagcagccaaagatggaattggccaacagttgccggagtttcttcagatttgaaccca
tggtggaataagatactggtaacttcatgtgtgattgcagttttatttgatcccttgttc
ttttacattccatacaccagcgaggaaaaaaagtgtatgggaagcgacgaaagagtgcag
actgcagctctgattttccgatcagtcacagacatcactttcctggtgcatatcatatac
caactatatgtggctatcaaatttgcactctcaagggtggatgaaagtttggtttttaga
tatgaatcggtatcccgagtgcaaatgattcggtttgcaaaggcattttctctcaagttg
tcatggcgatctttcctaactgacgttttcgctattttgcccataccacaactgctaata
gtaggattgtttttcaacatcggaggcaatgactacttgttaagaagaaagattgtgagc
ggttttcttctagtccaatatgtgccaagaatctatcgaatttatctttcatctgtcgcg
attacagaatctgcattatgggttagaggtgtatttaaccttttcctctacatccttgcg
agtcatgcacttggagccttttggtactttttttctattcaacgacagacatcatgttgg
catcgaacttgcatcgccgatttaaatcgaacagaatcagaatgcacattttactgtgat
gacagtactgctgcacttataaccggtaccccacaattcaatacaactctagacgagcaa
tgcgttctaaaagttccatataacatgaccgatccaccatttgattttggaatatttttt
gatgccctcaaaaatgatatccaagggaaaataaatgttccacaaaagattggttactgt
ttttggtggggcttgcgaaacttgagtaattttggtacaagtttaacaacgagtacctat
ctgtgggaaaacagctttgccattttaatttctatcatcggcttgctattgtttttatac
ctcattggaaatgtacagatttatatggagagggcaactaccagagcggatgaggtaaga
gagaagcttcggatcaaaaagaacgatatagatgattggatcgaaaataatggtatcggg
aaggacatgaaggaagagatcatgaaaaacatcaaggagaagttggaaaaggacataagt
gcagatctggatgatatatactctattcttcccccgaataccaggaaagttgtgaagcga
tttgtcggcatgaggacgctaagaaatgtaccaatgcttagcgaggtggatggaagagtt
ttgaagatgatgtgcgactatctgaagccggtcaagtaccaggagaatacaatggttttt
aaaatgggaaaaccatttgatagaatggtcttcattacagatgggtcaatgtggacttac
acgactgctactgatcatcagactagtgattctggaaaagcaacgtcaggaggactagtt
acttcttcgtccacggaagctcacttcctcgagaagggtgatgcttatggacacatgctt
ctgcaattagcatcatcatcttttacgacgcttcctatctcagatgcaaatgtcaagtgc
cacacaaaggtagaggcgtttgtcctcatggccagtgacttgagaaacatagtaactgag
tgcggtcggtgcggtcggtgcggagatttgtggccggatttcaagtataatgcttctcaa
gatgaggaggctgttcagaaggcaccgccggggcactttcagcaacaacaagggccaaag
aagcgtggaacaacatcaaatatccatcctaccggctacagtgggtga
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