Fragaria vesca (woodland strawberry): 101313219
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Entry
101313219 CDS
T02666
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
fve04141
Protein processing in endoplasmic reticulum
fve04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101313219
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101313219
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101313219
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
101313219
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101313219
03009 Ribosome biogenesis [BR:
fve03009
]
101313219
03110 Chaperones and folding catalysts [BR:
fve03110
]
101313219
04131 Membrane trafficking [BR:
fve04131
]
101313219
03051 Proteasome [BR:
fve03051
]
101313219
03029 Mitochondrial biogenesis [BR:
fve03029
]
101313219
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101313219
Protein phosphatases and associated proteins [BR:
fve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
101313219
Spliceosome [BR:
fve03041
]
Complex B
Other components
Prp19 complex
101313219
Complex C
Prp19-CDC5 complex
101313219
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101313219
Chaperones and folding catalysts [BR:
fve03110
]
Heat shock proteins
HSP70 / DNAK
101313219
Membrane trafficking [BR:
fve04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
101313219
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
101313219
Proteasome [BR:
fve03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
101313219
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
101313219
Exosome [BR:
fve04147
]
Exosomal proteins
Proteins found in most exosomes
101313219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
ParM_N
Motif
Other DBs
NCBI-GeneID:
101313219
NCBI-ProteinID:
XP_004300726
LinkDB
All DBs
Position
LG5:complement(507029..508888)
Genome browser
AA seq
619 aa
AA seq
DB search
MATKDEGPAIGIDLGTTYSCVGVWQHGRVEIIANDQGNRTTPSYVAFTNDGRLIGDAAKN
QVSTNPINTVFDAKRLIGRRFSDDSVKSDMKLWPFKVRGVGDKPIIVVNHNNMEKRFAAE
QISSMILEKMRDIAEAYIGSKVKDAVITVPAYFNDFQRQATKDAGLIAGLNVIRIINEPT
AAAIAYGLNRKDRVVRGKSVLIFDLGGGTFDVSLLNIEEGIFEVKATAGDTHLGGEDFDN
RMVTYFIQEFNRKHDKDISNNPKAVRRLRTSCERAKRTLSSTSQTTIEIDSLFEGIDFHS
TLTRAKFEELNMDLFTKCMEPLEKCLTDAKMDKSDVHDVVLVGGSTRIPKIQQLLQEFFN
GKALCKGINPDEAVAYGAAVQAAIMSGEGNIEKVQDLLLLDVTPLSLGIRMATGVMEVLV
PRNTAIPTKNERIYTTGFSGQTIMTVSVYEGERVNPKDNTLLGRFELTGISPALRGVPDI
GICFEIDNNGILVVSSEEKLTGNKSKLVISNSYKGRLSKEDIERMIKEAEKYKLEDEEYK
KTADAKTALETYAYDIRGRVNIHSHIDPSLKKKIADEVGKVINWLGSKNQPWSREEIDNR
MKKLENLCNPIFPKEVTGN
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaagacgagggtccagcgattggcattgatcttggaacaacttactcatgt
gttggagtttggcaacacggtcgcgttgagatcatagctaatgaccaaggcaatagaacc
acaccatcttacgttgcgttcaccaacgatgggcgtttgattggcgatgctgccaagaat
caagtttctaccaaccctatcaacactgtatttgatgcaaagcggttgattggtaggaga
ttcagcgatgactctgttaagagtgacatgaagttgtggcctttcaaggttcgtggtgtc
ggggacaaacctataattgtggttaaccacaacaatatggagaagagatttgctgctgag
cagatatcttccatgattcttgaaaaaatgcgtgatatagcagaggcctacatcggatca
aaagtgaaagatgctgttataactgtgccagcatacttcaatgattttcagcgtcaggct
acaaaagatgctggtttgattgcggggttgaatgtcatacgtattatcaatgagccaaca
gcggctgctattgcctatggtcttaacagaaaagacagagtcgttcgtggaaaaagcgtt
cttatatttgatcttggtggtggtactttcgatgtttctcttctcaatattgaagaagga
atttttgaggtgaaagctacagcaggggatactcatcttggaggtgaagattttgacaat
agaatggtgacctattttatacaagagttcaacaggaagcacgataaggatattagtaac
aatcctaaagcagtaaggaggctgagaacatcttgtgaaagagcaaagagaactctttct
tccaccagccaaaccaccattgaaattgattctttgtttgaaggtattgactttcactcc
acattaacaagggcaaaatttgaggagcttaacatggatcttttcacaaaatgcatggag
ccgttggaaaagtgtttgacagatgctaaaatggacaagagtgatgttcatgatgttgta
ctcgtaggcggatctactagaattcccaaaatacaacaactcttgcaggaatttttcaat
ggtaaggcgctttgcaaaggcatcaatcccgatgaggcagttgcatatggtgcggctgtg
caagctgcaatcatgagtggtgaaggtaatatcgagaaggtgcaggatttactactattg
gatgtcactccactttctcttgggataagaatggcaacgggagttatggaagttttagtc
ccaagaaacactgccatccccaccaagaacgaaagaatatacacaactggtttcagtggg
cagacaattatgactgttagtgtgtacgagggtgaaagagtaaatccgaaagataacaca
ttgttgggtagatttgagctcacaggaatcagtcctgcattaaggggagtgccggatatc
ggcatttgttttgagattgataacaatggaattttggttgtctcttccgaggaaaagcta
acaggaaacaagagcaagctcgtaatctcaaatagctacaaaggcaggttatctaaggag
gacatcgagaggatgatcaaggaggcagagaagtacaaattagaagacgaggagtataag
aagactgcggacgctaagactgcgttggaaacctatgcatatgacataaggggaagagta
aatattcactcacatatcgatcctagtttgaagaagaaaattgcagatgaggttgggaaa
gtaattaactggcttgggagtaagaaccagccttggagtcgtgaagaaattgataatagg
atgaaaaagttagaaaacctctgtaatcctatatttcccaaagaagtaactgggaattaa
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