Fragaria vesca (woodland strawberry): 101313272
Help
Entry
101313272 CDS
T02666
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101313272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101313272
Spliceosome [BR:
fve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
101313272
Complex C
U5 SnRNP specific factors
101313272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_RIG_1st
Nbas_N
RMC1_N
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
101313272
NCBI-ProteinID:
XP_004309638
LinkDB
All DBs
Position
Un
Genome browser
AA seq
344 aa
AA seq
DB search
MMQFAPSEGENALSVVGPRPMDLFTYTARPAPGPNGKQRTSSLEAPIMLLTGHQSAIYTM
KFNPAGTVIASGSHDKEIFLWNVHGECKNFMVLKGHKNAVLDLHWTTDGSQIVSASPDKT
VGAWDVETGKRIKKMAEHSSFVNSCHPARRGPPLVVSGSDDGTAKLWDMRVRGAIQTYPD
KYQITAVSFSDASDKIFTGGIDNDLKVWDLRKAEVLMTLQGHQDMITGMSLSPDGSYLLT
NGMDCKLCIWDMRPYAPQNRCVKIMEGHQHNFEKNLLKCSWSPDGSKVTAGSSDRMVYIW
DTTSRRILFMLPGHTGSVNESVFHPNEPIIGSCSSDKQMYLGEI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagtttgctccgagcgagggtgaaaatgctttgtctgtagttggtcctaggcca
atggatttgtttacatatactgctcgccctgcacctggacctaatggaaaacaaaggact
tcaagtttggaggcaccaatcatgctgctgacaggtcatcaaagtgctatatacacgatg
aaatttaaccctgctggaacagtaatagcatcggggtctcatgacaaggaaattttctta
tggaatgttcatggggaatgcaaaaacttcatggttttgaaggggcacaagaatgctgtg
ttggatcttcactggacaactgatgggtctcagatagtatcagccagtccagacaaaact
gtgggcgcatgggatgttgaaacaggaaaaagaattaaaaagatggcagaacactcttca
tttgtgaattcttgtcatcctgctcggagaggtccacctcttgttgtcagtggatctgat
gatggaactgcgaaactatgggatatgcgtgtgaggggtgccatccaaacatatcctgat
aaataccaaatcacagctgtcagcttctcggatgcatcggataaaatctttacaggaggt
attgacaatgatctcaaggtttgggacttgcgcaaggctgaagtactgatgacacttcaa
ggacatcaagatatgataacaggtatgtcactgagtcctgatggctcttatcttctgact
aatggaatggactgcaaactctgcatttgggatatgcgcccgtatgcaccacaaaatcgt
tgtgtgaagataatggaagggcaccaacacaactttgaaaagaacttgttgaaatgtagc
tggtcacctgatggaagcaaggtcacggctggcagttctgataggatggtctacatatgg
gatactacttctcgacgcatcttgtttatgctgccaggccacactggatccgtcaatgag
tctgtcttccaccccaacgaacccattattggatcttgcagtagtgataagcaaatgtat
ctgggagaaatctga
DBGET
integrated database retrieval system
