Fragaria vesca (woodland strawberry): 101313285
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Entry
101313285 CDS
T02666
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101313285
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
101313285
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101313285
NCBI-ProteinID:
XP_004293444
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Position
LG3:complement(1641377..1643378)
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AA seq
405 aa
AA seq
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MGGHNLVLIIFSVFLLSSSAYASRVAQFLAPGDFDVTSPKYGGKPNTDISQPLANAWKDA
CAATTPSRVIVPKGTFQLKGAVFKGPCKAPITVQVDGILQAPPIEAQLANKEFWVQFLEV
ERLTVSGTGTFDGQGQNSWKDNDCNKNPNCGGLAINVRFDKVKNSLVRDVTSLNSKNFHF
NILGCEHLTFQHVTIKAPGDSPNTDGIHMGRSTGINITDMNIGTGDDCISVGDGTRQLTV
SKVSCGPGHGISIGSLGRYDNEDDVSGLNIRDCTLSNTLNGVRIKTFPASPKATTASDIH
FEKITMNNVANPVLIDQEYCPWGQCNKQIPSKVKISNVSFKNIIGTTSTAEALKIVCAKG
LHCDQVVLSDIDLKLSGKGTLTSHCANVQPTIARVPPPLACATKA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgggaggacacaatctagtcttgattatcttttcggtatttttgttatcatcctcagca
tatgcaagtagagtcgcacagtttttagctcctggtgactttgatgtgacaagtccgaaa
tatggtgggaagcctaatactgatattagtcagcctttggcaaatgcttggaaagatgct
tgtgcagcaacaacgccaagtagagttattgttccaaaagggacatttcaactaaaagga
gcagttttcaaaggtccttgtaaggctcctattacggttcaggttgatggcatactgcag
gcgccaccaattgaagcccaattagcaaataaagaattttgggtccagtttttagaggtt
gagaggctcactgtatcaggtactggaacatttgatggtcaaggacaaaattcttggaaa
gacaacgactgcaataaaaatccaaactgtggaggtctagccattaatgtgagattcgac
aaagtgaaaaattcattagtaagggatgtgacatcacttaacagcaaaaatttccacttc
aatattttagggtgtgaacatcttacattccaacatgtcaccatcaaagcaccgggagat
agccctaacacagatggaatacatatggggcgctcaaccgggattaacattacggacatg
aacatcggaaccggagacgattgcatatcagttggtgatggtaccagacaactaactgta
agtaaggtaagttgtggaccaggtcatggaataagtatcggaagtctcggaaggtacgac
aatgaagatgacgtcagtggactcaatattagagattgtacccttagtaatacactgaat
ggtgttagaatcaagacatttcctgcttctcctaaagctaccaccgcctcggatattcac
ttcgagaaaatcacaatgaataatgttgctaacccagtcctcattgaccaagaatactgc
ccatggggtcagtgtaataaacagattccatcaaaagtcaagatcagcaatgtgagcttc
aagaacattatagggacaacttcaactgcggaggctttgaagattgtatgcgctaaaggc
ttgcattgtgatcaagtggtactgagtgacatagatctcaagttaagtggcaaaggaact
cttacatctcattgtgcaaacgtgcaacccacgattgctcgagtgccaccgcctcttgct
tgtgctaccaaggcttga
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