Fragaria vesca (woodland strawberry): 101313377
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Entry
101313377 CDS
T02666
Name
(RefSeq) tRNA pseudouridine synthase-like 1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101313377
Enzymes [BR:
fve01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
101313377
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101313377
Prokaryotic type
101313377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
101313377
NCBI-ProteinID:
XP_004309887
LinkDB
All DBs
Position
Unknown
AA seq
350 aa
AA seq
DB search
MSENLKHSLESRSQSPKRPSKISKTTSEEAEAESMSKPQGIQRYLIAIEYIGTRFSGSQQ
QSNCRTVVGVLEEAFRKFIGQPVSIFCSSRTDAGVHALSNVCHVDIERISKRKPGEVLPP
HEPIVVQRAVNHFLQKNEGDVMVVDVRSVPADFHARFKAQERTYFYRLLSGPEPLSTFEK
DRAWHIPEELDVLAMQEACKILVGHHDFSSFRAAGCQAKSPIRTLDELNVSEVVSSPNFP
TIAERTRNLVQKDIQCTNNPEADCHSSFNGGTDQGFGLRKKHRCIVVTARARAFLYHQVR
LLVGVLKCVGTGDLKIPDVERILNAKTVTAASPMAPACGLYLGHVRYDLP
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaatcttaagcactcactagagagccgctcccaatctcccaaaagaccttca
aagatttccaaaaccacaagcgaagaagcagaagcagaatccatgagcaaaccccaggga
atccaacgctatctgatcgcaatagagtacattggcactcgcttctctggctctcagcaa
cagtccaattgccgcactgttgttggcgttcttgaggaggcttttcgcaaatttattggg
cagccagtgtcaatcttctgttcgagtcgaactgatgctggagttcatgctttatccaat
gtttgtcatgtagatattgagcgcataagcaaaagaaagcctggtgaagtgttaccacct
catgaacctatagtggtccaaagagctgtaaaccatttcttacagaagaatgaaggtgat
gtaatggtggttgatgttcgaagtgttccagctgattttcatgctagatttaaagcccaa
gaacgcacgtacttctatcgcttgctatctgggccagagcctttgtcaacctttgaaaaa
gaccgcgcatggcatatacctgaggagctggatgttttggctatgcaggaagcctgcaaa
attctggttggacaccatgattttagttcatttagagcagcaggttgtcaggcgaagtca
ccgatcagaacactagatgagttaaatgtgtctgaggttgtctcatctccaaactttcca
acaatagcagagaggacaagaaatttagtgcagaaagatattcagtgcaccaacaatccc
gaggccgactgccactctagtttcaatggaggaactgatcaaggatttggcttgaggaaa
aaacacagatgcattgttgtaaccgcacgagcacgtgcctttctataccaccaggtaaga
ctgcttgttggtgtcctcaaatgtgttggaactggagatctaaaaatacctgacgtggag
aggattttgaatgcaaagacagtgactgctgctagccccatggcgcctgcttgtggtcta
tatcttggacatgtgagatacgatttgccatga
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