Fragaria vesca (woodland strawberry): 101313393
Help
Entry
101313393 CDS
T02666
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101313393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101313393
03110 Chaperones and folding catalysts [BR:
fve03110
]
101313393
03029 Mitochondrial biogenesis [BR:
fve03029
]
101313393
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101313393
Enzymes [BR:
fve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101313393
Messenger RNA biogenesis [BR:
fve03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101313393
Chaperones and folding catalysts [BR:
fve03110
]
Heat shock proteins
HSP60 / Chaperonin
101313393
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101313393
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101313393
Exosomal proteins of other body fluids (saliva and urine)
101313393
Exosomal proteins of breast cancer cells
101313393
Exosomal proteins of colorectal cancer cells
101313393
Exosomal proteins of bladder cancer cells
101313393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
101313393
NCBI-ProteinID:
XP_004294947
LinkDB
All DBs
Position
LG3:23312993..23316928
Genome browser
AA seq
601 aa
AA seq
DB search
MASTFAAMTSVGSLAAPSGRVADKKLSSRASIASFSFSKRPNVALRRTRSPRVSAMAKEL
HFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELED
PVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTT
KALVKELKLMSKEVEDSELADVAAVSAGNNYEVGQMIAEALSKVGRKGVVTLEEGKSAEN
FLYVVEGMQFDRGYISPYFVTDSEKMAVEYENCKLLLVDKKITNARDLINILEDAIRGGY
PVVIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGDRKSQYLDDIAILTGGTVIREEV
GLTLDNVGKEVLGQAAKVVLTKDSSTIVGDGSTQEAVNKRVAQIKNLIEAAEQEYEKEKL
SERIAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASK
VDAIKNSLDNDEEKVGADIVKRALCYPLKLIAKNAGVNGSVVSEKVLSSDNFKYGYNAAT
GNYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPAGNPMDNSGYG
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacttttgcagccatgacttcagtgggttcattggctgctcccagtggccgt
gtggctgataaaaagttgtcatctcgggcttccattgcttcattctcattctctaagagg
cccaatgttgctctcaggaggactcgctcccctagagtctctgccatggccaaagagttg
catttcaacaaggatggttctgccatcaagaagcttcaagctggtgtcaacaagctcgcc
gaccttgttggggttacccttggtcccaagggtaggaatgttgttctggagagcaagtat
ggttcccccaagattgttaacgatggtgtgaccgtggccaaagaggttgagttggaggac
cctgttgagaacattggagctaagttggtaaggcaggcagctgccaagactaatgacttg
gctggtgatgggacaacaacttctgttgttcttgcacaaggtcttatcgccgaaggtgtc
aaggttgttgcagctggagcaaaccctgttctgatcacacgtggtatagaaaagacaact
aaagctcttgtaaaggagcttaagttgatgtccaaagaggttgaagacagtgaactagca
gatgtggctgctgtcagtgcaggaaacaactatgaagtaggacaaatgattgctgaagcc
ttgagtaaagtgggtcgaaagggtgttgtcacacttgaagagggaaaaagtgctgagaat
tttctttatgttgttgaaggaatgcaatttgatcgtggttatatctcaccttactttgtc
actgatagcgagaaaatggctgttgaatatgagaactgcaagttgcttcttgttgataaa
aagataacaaatgcaagagaccttattaacattttggaggatgccattagaggaggatat
ccggttgtgataattgctgaagacattgaacaagaagctcttgcaactcttgttgtgaac
aagcttagaggttctctaaagattgctgccctaaaagctccaggatttggagatcgcaag
agccagtatctagatgatattgccatattgaccggaggaactgtgattagagaagaggta
gggcttacattggacaacgttgggaaggaggtccttggccaagctgcaaaggtcgtgctt
acaaaggattccagcacaattgttggtgatggaagtacccaggaagcagttaacaaaaga
gttgcacaaattaagaaccttatcgaggctgcagagcaggagtatgaaaaggagaaactt
agtgaaaggattgccaaactagctggtggtgttgccgtgattcaggttggagcacaaact
gagacagagctgaaagaaaagaaacttagagttgaggatgctctcaatgccaccaaggca
gctgttgaggagggtattgttgttggaggaggatgcaccctcttgagattggcctccaag
gttgatgcgattaagaattctcttgataatgatgaagagaaggttggagcagatattgtt
aaaagagctctttgttaccctctgaaattgattgccaagaatgctggtgtgaatggaagt
gtggtcagcgagaaggtgctttctagtgacaacttcaagtacggatataatgctgcaact
ggaaactatgaagatttaatggctgctggtatcattgatccaaccaaggtggtgagatgt
tgcctggagcatgcggcctctgtggcgaaaactttcttgatgtcagactgtgtggttgtt
gagatcaaggagccggagccagtgcctgctggaaaccccatggacaactcaggatacggt
tactga
DBGET
integrated database retrieval system
