Fragaria vesca (woodland strawberry): 101313406
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Entry
101313406 CDS
T02666
Name
(RefSeq) protein SHOOT GRAVITROPISM 5-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101313406
Transcription factors [BR:
fve03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101313406
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
C2CH-4th_BIRD-IDD
zf-C2H2_6
V-ATPase_G_2
zf-C2H2_4
zf-met
zf-H2C2_2
Zn_ribbon_4
Motif
Other DBs
NCBI-GeneID:
101313406
NCBI-ProteinID:
XP_004297807
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All DBs
Position
LG4:complement(23195230..23197904)
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AA seq
471 aa
AA seq
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MLANNNHTNTTTASSAAPSSSSDHHHHVFPPLENGVPPPPTTHKRKRRPAGTPDPDAEVV
SLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKREIQDQVKKRVFVCPEP
SCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCDKCSKGYAVQSDYKAHLKTCGTRGHSC
DCGRVFSRVESFIEHQDTCSVRHVVRPELQALQPATACSSRTASSTSPSSDGHFSINNNN
APHPMPGLTVMPKPNEQPVVFIRSHEGHDGNPSPSNRHQQQQPQEHEQEHMLELKLLPSS
DAQTSPRNEEENYATRLKLSIGGSSHSGDQNNESPRCSSREMNTNIGIGGGASWEVARLK
DIASEELKLAMSEKAYAEEARREAKRQIEMAEVEFANAKRIRQQAQAELQKAQLLKEQST
KKVSSAIMQITCPSCKTHFHAGVGPSVGETTSSLGLSYMSSATTEGEGGEQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgttggccaacaacaaccacaccaacactactactgcctcctctgctgctccctcatct
tcctctgatcatcatcatcatgtcttccctcccttagaaaatggagtaccaccgcccccc
accacgcacaaaagaaaacgccgacccgccggcacccctgatccggatgccgaagttgtg
tccctctccccgaaaacactactggaatcagaccgttatgtatgcgagatctgcaaccag
ggcttccagagagaccagaatctacagatgcacagaagaagacataaggtgccttggaag
ctgctgaagcgggaaatacaggatcaggtgaagaagagagtgtttgtctgcccggagccg
agttgtctccaccacgacccttgccacgctctcggcgatcttgtcggaatcaagaaacat
ttccggcggaaacacagcaaccacaagcaatgggtgtgcgacaagtgctccaaaggctac
gccgtacaatccgattacaaggcccatctcaagacctgtggcaccagaggacattcctgc
gactgtggccgtgtgttttccagagtggagagtttcattgagcaccaagacacttgcagc
gtgcgacatgttgtccgaccagaactgcaggccctccagccggcgactgcctgctcatca
cgaacagcgtcgagcactagtccctccagcgacggccatttcagcattaataacaacaat
gcacctcatccgatgcccggattaacagtaatgccaaagccgaatgagcaacccgttgtg
ttcataaggtctcacgagggtcatgatggtaatccttccccttctaaccgccaccaacag
caacagccacaagaacatgaacaagagcatatgctggaacttaaactccttccatcttca
gacgcacaaacgtctcctcgaaacgaagaagaaaactacgcaacgcgtttgaagctttcc
ataggcggatcatcgcacagcggcgatcaaaataacgaatcacctcgatgctcttcaagg
gaaatgaacacaaacattggcattggtggcggagcaagttgggaagtagcgaggttgaaa
gacattgcctcggaggagttgaagttggccatgtcagaaaaggcctatgccgaagaagca
agacgagaagccaagcggcaaatagagatggcagaggtggaattcgcaaacgcaaagagg
atcaggcaacaagcgcaggcggagcttcaaaaggctcagctactaaaagagcaatccacc
aagaaagtcagctccgccattatgcaaatcacttgtccatcttgcaagacacacttccat
gccggagtgggaccctccgtcggcgagacgaccagctccctcggcctgagctacatgtcg
tccgccacaaccgaaggtgaaggaggagagcaatga
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