Fragaria vesca (woodland strawberry): 101313468
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Entry
101313468 CDS
T02666
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101313468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101313468
03036 Chromosome and associated proteins [BR:
fve03036
]
101313468
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101313468
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101313468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Serpin
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
101313468
NCBI-ProteinID:
XP_011470864
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Position
Un
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AA seq
1126 aa
AA seq
DB search
MKKIYPLVFSFSSFTLSLFRALQPFRSRAAESKERTIVPNSYSFGASSSPAFGQQSSAFG
AFSTPVFGGSSNQRSPFGGASGTSVLGQKPAFGAFGLSPAQTSLFGSTAQPSQPAFRSNM
FGNTSSPFGGSQPAFGTNTTPAFGSTNTTAFGSTNTPAFGTTTNPAFGGQATPAFGATSA
SPFGGTGTPAFGAPSTPTFGSTPSPAFGSTGSAFGTTSSSLFGTGGAFGATPSTPSFGQS
SSAFGTTTSAPAFGQSSTGFGFSSSTPAFGQSSSTFGSTQFGASSPFGGQSSSFGVQSTT
PTLGNNAFGQSTFGAQQGGSRATPYTGTSEPDSNGLGKLESISAMPAYKEKSHEELRWED
YQLGDKAGPSPAGGGGFGMSTVQTNPLNPIHATPFAQTCSSPFNHSTSSSLFAPKTSSFP
SAGFGVTSSSPFSSSSPFSSSSPFSSSWPFSSSTQGNLFTPASSAPAFGSAPAFGQTSSP
LPFSSPSSFSFSTAATSSTPSFNFPTPSNPQTQSAQTGTISFQLNPSTFRSNLFNNTSSL
QSSSLGTTSNQLGNNPPAETDSSTTITINEPSLSNGGSSQPGFGYTSSSTLGTITINSSS
GSRITITPASSTTITITPTSGSTTVTIAPSSGTTSTSTSGHTPFASPFVVPSQASQPSQT
STSIFYTINSFDQIQPGNRDGFGSSFERLQNNSGRWLGSACPATNPFNLLHRPGQLPSGH
AAPSPSVQNGISGSLTAMRDLIESVRNQSDVALRITKELLLTKGKDKNMVYSPLSIHVVL
SLIAAGSTKGHPLHDEMLKFLKSRSIEQLNELASNLVPLVFADGTTSGGPSLAFANGVWV
ETSLPVKASFKEVLDNAYKAVLKQVDFRTKPEEARCEVNSWVEKVTRGLIKDLLPYETVT
CATRIILANALYFKGAWDQKFIESRTNMFDFHLLSGKSVKAPFMTSWKDQFISVFDSFKV
LKLPYKQGEDHNRRFSMYMFLPNASNGLPSLVERFCSEAGFLDRYLPCRKVEVDKFLIPK
FKITFGIEVSQVLETLGLKLPYLSETVVGDEPFVNLIIHKSFIEVNEEGTEAAAATAAVA
AFGCAAPCPVIEKIDFVADHPFLFLIREEVTGAVMFVGHVLDPIAE
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagatctatccgttagtattttccttttcttcctttacactttctctcttccgc
gctctgcaacctttcaggtctcgcgccgcagaatcaaaagaaaggacgattgttcctaac
tcttactcttttggtgcttcatcctcgccagcttttggacagcagagttctgcatttggt
gcattttctactccagtatttggtggatcgtctaatcaaagaagtccatttggtggagca
tctggtacgtctgttcttggtcagaagcctgcttttggagcatttgggttgagtcctgct
caaacaagtctatttgggagcacagctcaaccatcacaaccagcattcagaagcaatatg
tttggtaacacctcttcaccatttggtggaagtcagcctgcatttggaactaatactacc
ccagcctttggttcaacaaacaccacggcctttggttcaacaaataccccagcctttggt
accaccaccaaccctgcttttggtggccaagccactccagcctttggggccacaagcgct
tcgccttttggtggtacaggtactccggcctttggtgcaccaagtactcccacctttggc
tcaacaccaagtcctgcatttggaagcacaggatctgcatttgggacaacaagttccagc
ttgtttggaactgggggagcatttggggcgactccaagcaccccgtcttttggtcaatct
agctcagcttttggtactacaacaagtgctcctgcttttggccaatcaagcacaggtttt
ggcttttcatcaagtactcctgcatttggccaatcaagttctacctttggtagcacccaa
tttggtgcttcatctccttttggagggcagagttcttcatttggggttcagtcaacaaca
ccaacacttggaaacaatgcctttggacagtcaacgtttggggcccaacagggtggaagt
agagcgactccttacacaggcacatctgaaccagatagtaatggactggggaaattggag
tcaatttcagcaatgccagcctataaagaaaaaagtcacgaggaattgagatgggaggat
taccaattaggggataaagctggaccgtctcctgctggtgggggtggctttggcatgtca
actgtacagacaaatcctttgaatcctattcatgcaacaccgtttgctcaaacgtgttca
agtccttttaatcattcaacctcatctagtttatttgctccaaaaacctcatccttccct
tctgctggttttggtgtcacttcatcttcaccatttagttcgtcttcaccgtttagttcg
tcgtcaccatttagttcttcttggccgtttagttcatcaactcaaggcaatttgtttaca
cctgcatcatcagccccagcatttggctctgccccagcatttggccaaacatcgtctccg
ttgccttttagttcaccgtcgtccttctcattctctaccgcggccacatcatccactccc
tcattcaatttccccactccttcaaacccgcagacacagtctgctcaaacaggcactatc
tcatttcagctgaatccatcaacctttcgttcaaacttgttcaataatacttccagtttg
cagagcagttccttgggcactacaagcaaccaactgggtaataatccaccagctgaaacg
gattccagtactactatcaccataaatgaaccatcattgagtaatggtggatcaagtcag
cctggttttggctatactagtagctcaactttgggcactatcaccataaactcaagttct
ggatcaaggatcacaataaccccagcttcttcaactactatcaccataacccccacttca
ggctccactactgtcaccatagctccaagttccggcactacctcaacttctacatctgga
cacactccatttgcatctcccttcgttgtgccttcccaagcttctcagccatctcagact
agtacttctatcttctacaccatcaatagttttgatcaaattcagccagggaacagagat
ggctttggttcttcattcgaaagattgcagaataactccggacggtggcttggtagtgca
tgccctgctacaaatccgtttaatctgctacacaggcctggtcagcttccatctggtcat
gctgctccttcaccatcagttcaaaatggaatttcgggatctttgacagctatgagggat
ctcatagaatccgtccgcaaccaatctgatgtcgcactgagaatcacaaaagaactgctt
ttgactaaaggcaaggacaagaacatggtctactctcctctgtccatacatgtggttctt
agcctgatagcagctgggtcgacaaagggtcaccccctccacgatgagatgctgaagttc
ctcaagtccaggtccatcgagcagctaaatgagcttgcctcgaatcttgtccctctggtc
tttgccgatggaaccacaagtggcggccctagcttggcattcgccaatggtgtttgggtt
gaaacttctctcccagtcaaggcttccttcaaagaggtattggacaatgcgtacaaggca
gttctaaagcaagtagattttaggaccaaacctgaggaagcgcgttgcgaagttaactca
tgggtggagaaggtgaccagaggccttatcaaagatcttcttccatatgaaacagttacg
tgcgccacaaggatcattcttgcaaatgctttgtacttcaaaggagcttgggatcagaag
tttattgaatcaagaacaaatatgtttgattttcaccttctcagtgggaagtcggttaag
gcacccttcatgaccagttggaaggatcagtttataagtgtctttgacagtttcaaagtc
ttaaagcttccttacaaacaaggtgaggatcacaatcggcgcttctccatgtacatgttt
cttcctaatgcaagtaatgggctgccatctctggttgagcgattctgttcagaggctggg
tttttggaccgctatcttccttgcagaaaagttgaagttgacaaatttttaatcccgaag
tttaagatcacttttggcattgaagtttctcaagttctggaaactttaggactgaagttg
ccatatttgtcagagacggtggttggtgatgaaccatttgttaacttgataatccacaag
tcctttattgaagttaatgaagaaggcacagaagctgctgctgctactgctgccgttgct
gcgtttggctgcgctgctccttgtcctgtgattgagaagatagactttgtggcagatcat
ccattcctttttctgatccgagaagaagtgactggagcagtgatgttcgttgggcatgtc
ctcgaccccattgcagagtga
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