Fragaria vesca (woodland strawberry): 101313550
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Entry
101313550 CDS
T02666
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101313550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101313550
Spliceosome [BR:
fve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
101313550
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
101313550
NCBI-ProteinID:
XP_004288254
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Position
LG1:14411703..14416386
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AA seq
486 aa
AA seq
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MATLADSFLADLDELSDNEADVPVEDDGDVANMEEDVDGDLADLETLNYDDLDSVSKLQK
SQRFADIMQKVEGALEKGSDMSNHALVLEDDPEYQLIVDCNALSVDIENELVIIHNFIRD
KYRPKFPELESLVHHPIDYARVVQKIGNEMDVTLVDLEGLLPSATIMVVSVTASTTSGKP
LPEDVLEKIVDACDRALALDSAKKKVLEFVESRMGFIAPNLSAIVGSAVAAKLMGMAGGL
AALAKMPACNVQLLGAKKKNLAGFSTATSQYRVGYVEETEIFQTTPPALRMRAGRLLAAK
STLAARVDSTRGDPSGNTGKAFREEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSMGQSKLAA
KVAKKFKDKNYGSAGGATSGLTSSLAFTPVQGIELSNPQAHGQQLGSGTQSTYFSETGTF
SKIKRI
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctactcttgccgattcgtttcttgctgacctcgatgagctgtctgacaatgaagct
gatgttcctgttgaagatgatggtgatgttgcgaacatggaggaagatgttgatggggac
ttggcagacttggagacacttaactatgatgatctggatagtgtttcgaaattgcagaaa
tcgcaaagatttgctgatataatgcagaaagtggaaggtgcgcttgaaaaaggttccgat
atgtcaaatcatgcactagttttggaagatgatccagaataccagttgattgtggactgt
aatgctctgtcagttgacattgagaatgaacttgtaatcatccacaattttattcgggac
aaataccggccaaaatttccagagcttgagtcacttgttcatcatccaattgattatgca
cgagttgttcagaaaattgggaatgaaatggatgtaaccctggttgatctggaggggctt
ttaccttcagcaactattatggttgtgtcagttacagcttcaactacaagtggaaagcca
cttcctgaggatgtcctggagaaaatagttgatgcatgtgatcgagcccttgcgcttgat
tcagcaaagaaaaaggttcttgaatttgttgaaagtagaatgggttttattgcaccaaat
ctttctgctattgttgggagtgctgttgcggcgaaacttatggggatggctggtggtctt
gctgccttagctaaaatgcctgcttgtaatgttcagcttcttggtgctaagaaaaagaac
cttgctgggttttccactgcaacatcacaatatcgtgttggttatgttgaggagactgag
atatttcaaactacaccccctgctcttaggatgcgtgctggtaggctcttggctgcaaaa
tcaacccttgcagcacgggtggattctacaagaggagatccatctgggaacaccgggaag
gccttccgagaggagatccataagaaaattgagaaatggcaggagcctccccctgcaaag
caacctaaaccacttccggttcctgattctgaacctaaaaagaagagaggtggacgtcga
ctgaggaaaatgaaagaaagatatgcgataacagacatgaggaagctcgcaaacaggatg
cagtttggcatacctgaagagagttctttaggggatggactgggtgaaggatatggaatg
cttggtcaggccgggagtggcaagttacgcgtgtcaatgggtcagagcaaacttgctgcc
aaagttgctaaaaagttcaaggataagaattatggaagcgctggtggtgctacatctgga
ctgacttcaagtttggcatttactcctgtgcaggggattgagctctcgaatcctcaggct
catggacagcaacttggcagtggaactcagagcacctacttctctgaaacaggaacattt
tcaaaaatcaagaggatctga
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