KEGG   Fragaria vesca (woodland strawberry): 101313600
Entry
101313600         CDS       T02666                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:fve03400]
    101313600
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    101313600
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN UBA_RAD5A zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_4 DEAD zf-RING_2 zf-C3HC4_2 Prok-RING_4 ResIII RING_XB3-XBAT31 zf-RING_5 AAA_34 UBA UPF0561
Other DBs
NCBI-GeneID: 101313600
NCBI-ProteinID: XP_011462493
LinkDB
Position
LG4:complement(6345239..6351681)
AA seq 1240 aa
MDSKEDDIPMGIPLMPIPMLVKRRNTSTGARVSVVVKQEWPEMESGQREKIPVSKPQISS
IDEVPDTQEEPVPVKFKQECSDEPDRLDESMRLSEVETMSVVPDSLGDLAEEEAEPVSIQ
IQKELEPVSVQVQKEAESVGSEEVDEAATMSEVPDSLATMSEVPDSLAEQQEEPVSIPVE
KKGADEMDEGEKLEESKHEKLEQNEAPDSGEVLYVEPISTFIPLEEYEKYEAEKLFVSKP
KGIVKKEVGDGQEGLFQQEDSVKRIRSVLGFEMPEFEIVRALSECGGNETAAINFIFENA
RAVVVKKTDQHADALKPKSVVKKEVADCEVVSVKQVRPPNVEDGDFPTEKDWLSVGGTVV
TALSTSKGRKLVDNEIVNLSFPTVNSSNKTKWIVRFSTKRFGEIGRFSMEWAKSVVPLVQ
SGKVKVRGRCIAAPPVLSMMQEIMLYISFYIHHSIFTEVEKPSWKLDASPNIDSTLYPLL
TLFKLLNVQPYQKAVFTPEELDSRKRLLNIERIPNEAPLALPAPKRRKGSQQGSQKSPEE
NNEQSISESSLNKIVGAAKVYDLEEMEPPCTLRCVLKPYQKQALYWMSELEKGIDVEKAQ
KMLHPCWAAYRICDERASSIYVNIFTGEATTKFPTATLMARGGILGDAMGLGKTVMTIAL
ILARPGRKGSNDIEITKKRKIDSDTTTPSKPKGGTLVVCPLSLLSQWKDELETHSEPESV
SVFVHYGGYKTTNPKAISVHDVVLTTYGVLAAAYKSDGDESLFHQVDWYRVVLDEAHTIK
SSKTQGAQAVFTLSSHCRWCLTGTPIQNNLEDLYSLLCFLHVEPWCNWAWWNKLIQRPYE
SGDPRGLRLIKAILRPLMLRRTKETKDKVGRPILVLPPTDIQTIECEQSDAEHDFYNALF
RRSKVQFDQFVAEGKVLHNYANILELLLRLRQCCNHPYLVMSRSDSQKKSSGGDSQKYAE
LDKLARTFLEANQDSSTSKQAVPSRAYVEEVVEGIRKGEHKECPICLEFADDPILTPCAH
KMCRECLLSSWGRPASGPCPICRRLIKRTDLISCPSESRFQVDFVEDWTESSKVAKLLDC
LEHILQSGSGEKSIIFSQWTAFLDLLEIPMKRRGIEFLRFDGKLTQPQRERVLDEFNEST
VRRVLLMSLKTGGVGLNLTAASNVFIMDPWWNPAVEEQAIMRIHRIGQKRTVTVRRFIVK
DTVEERLLQVQARKQRMIAGALTDEEVRSARIEELKMLFT
NT seq 3723 nt   +upstreamnt  +downstreamnt
atggattccaaagaggatgatatccccatgggaattcctctcatgccgattccgatgttg
gttaagcggagaaatacgagcaccggtgctcgtgtctcggtggttgtcaagcaggagtgg
ccggagatggagtcggggcagcgcgaaaagattcccgtctcgaagccacagatctcgtcg
attgatgaggttcctgacacgcaggaggagcctgttccggtgaaattcaagcaggagtgc
tccgatgagccggatcggctagacgaatcgatgcggctaagcgaggtcgaaacgatgagc
gtggttcctgatagcctgggggatttggcggaagaagaagccgaaccggtttcgattcag
atccagaaagaattggaacctgtttcggtccaggtccagaaagaagcggaatctgttgga
tctgaggaggtggatgaggctgcgacgatgagcgaggttccggacagcctggctactatg
agcgaggttcctgacagcctggctgagcaacaagaggagcctgtttcgattccggtggag
aaaaaaggagctgatgagatggatgagggcgaaaagctcgaggagtctaagcatgagaag
ttagagcagaatgaggctccggatagtggcgaagtcctatatgtggaacctatttcgaca
tttattccattggaggagtatgagaaatacgaagcggagaagctttttgtgtcgaagccg
aaagggatagtgaagaaggaggttggagatgggcaagagggtttgtttcagcaggaagat
agtgtgaagagaatccggtcagttcttgggtttgaaatgcctgaatttgagattgttcgg
gcactctcagaatgcggtggcaacgaaactgcagccattaatttcatctttgaaaatgcg
agggcggttgttgttaagaaaactgatcaacatgcggatgcgttgaagccgaagagcgtg
gtgaagaaggaggtcgctgattgtgaagtggtttcggtgaaacaggtgaggccaccgaat
gtggaggatggggacttccctacggagaaggattggctttcggtgggagggacagtggtt
actgcactttcgacttccaaagggaggaaattggtagacaatgagattgtcaacctctct
tttcctaccgtaaattccagcaacaaaaccaagtggattgttcgtttctcaaccaagcga
tttggagagattggacgcttttcaatggaatgggcaaaaagtgttgttccacttgtacaa
tctggtaaggttaaagttcgtgggcggtgtatagctgcaccgccagtgctttctatgatg
caagagatcatgttgtatataagcttttatattcaccattcaattttcacggaagttgag
aagccttcatggaagctagatgcttcccctaacatcgattccactttatatcctctcctc
accctgttcaaattgttgaacgtccaaccgtatcagaaggctgtgttcactccagaagaa
cttgattccagaaaacgtctcctgaatattgaacgtattccaaatgaagctccattagct
ttgcctgcaccaaaacgaagaaagggttcccaacagggttcccaaaagagccccgaagaa
aacaatgaacaatccatttctgagtcatctctaaacaaaattgttggtgctgcaaaagta
tatgacttagaggagatggaacccccatgtactctcaggtgtgttctgaaaccataccag
aaacaagctctctattggatgtctgaattggaaaagggaattgatgttgagaaggcccag
aaaatgctccatccttgctgggcagcctaccgtatatgtgatgagagggcttcttcaatc
tatgtgaacattttcacaggggaggcaaccacaaaatttccaactgcaactctgatggca
agaggaggaatactaggagatgcaatgggacttgggaagactgtgatgacaattgctcta
atacttgcaagaccaggcagaaaaggctctaatgatatagaaattacaaagaagaggaag
atagattcagatacaaccaccccatcaaaaccaaagggaggcactcttgttgtctgtcct
ttgtctttgttgagccagtggaaggatgaacttgaaactcattcagagcccgaaagtgtt
tctgtttttgttcactatggtggatacaaaaccacaaaccccaaggctatctcagtacat
gatgtggtcttgacaacatatggtgtcttggctgcagcttacaaaagtgatggggacgag
agccttttccaccaggttgactggtatagggtggtgcttgatgaagctcatacaattaag
tcttccaagacccaaggtgctcaggctgttttcactttgtcatcgcattgcagatggtgt
ttgactggaactcctattcagaataatttggaagatctctacagcctcttatgcttcttg
catgttgaaccatggtgcaattgggcatggtggaacaaattaatccaaaggccttatgag
agtggagatccaagaggactgagattgataaaggccattttgagaccactgatgttaaga
agaacaaaagaaacaaaagataaagtgggaaggcccatacttgttctccctccgactgac
attcaaaccattgagtgtgaacagtcagatgctgaacatgacttttacaatgcccttttc
aggagatcaaaagtccagtttgatcagtttgtagccgaaggtaaggttcttcacaactat
gcaaatatccttgaactgctacttcgattgaggcagtgttgcaaccatccatatcttgtc
atgagtcggagcgattcacaaaagaaaagcagcgggggtgactcacaaaagtacgcagag
ttggacaagcttgcaagaacatttcttgaagctaatcaggattcttcaacttcaaagcag
gctgtccccagccgagcatatgttgaagaggttgttgagggtatccgtaagggtgaacac
aaagagtgtcccatatgcttggagtttgcagatgatcctatacttacaccatgcgcccat
aagatgtgcagggagtgtcttctctcaagctggggaagaccagctagtggtccatgccca
atatgtcggcgattgataaaaagaactgacctcatatcttgcccatctgaaagccgcttc
caggttgattttgtggaagattggacggaatcttcaaaggttgcaaagctcttggattgc
ttggaacatattcttcagtcaggttctggtgaaaaaagcattattttcagtcagtggact
gcatttttggatctcttggagatccctatgaagagaagaggaatcgagtttcttaggttt
gacgggaagctgacacaaccacagagggagagggttttggatgagttcaatgagtccaca
gtgagaagggtgttgttgatgtctttgaaaactggtggtgttggtcttaatttaactgcc
gcatctaatgtctttataatggatccatggtggaatcctgcggttgaggagcaagcaata
atgaggattcatcgcattggacaaaaacgtacagtcactgttagaagatttattgtcaag
gacacggtggaggaacgcctgctacaagttcaggccaggaagcagcgaatgattgccgga
gctctaactgatgaggaagttcgatctgctagaattgaggagctcaaaatgctgttcaca
taa

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