Fragaria vesca (woodland strawberry): 101313605
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Entry
101313605 CDS
T02666
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00061
Fatty acid biosynthesis
fve00071
Fatty acid degradation
fve01100
Metabolic pathways
fve01212
Fatty acid metabolism
fve04146
Peroxisome
Module
fve_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
101313605
00071 Fatty acid degradation
101313605
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
101313605
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fve01004
]
101313605
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101313605
Enzymes [BR:
fve01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
101313605
Lipid biosynthesis proteins [BR:
fve01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
101313605
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of breast milk
101313605
Exosomal proteins of breast cancer cells
101313605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
101313605
NCBI-ProteinID:
XP_004298900
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All DBs
Position
LG5:complement(2605412..2611367)
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AA seq
666 aa
AA seq
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MAGTKYKYLIEVEKGKPAKDGRPSLGPVYRSVFAKDGFPPPIAGMDSCWDVFRMSVEKNP
GNRMLGRRETVNGKAGEYVWLTYKQVYDIVVKVGNSMRTLGLVEGDKCGIFGANCPEWIM
SMEACNAHGLYCVPLYDTLGAGAVEFIICHAEVSLAFVEEKKIPELLKTLPNASKYLKTL
VSFGNVTPEQKESVEKHGSVLYSWNEFLQLGESKDFDLPVKKKSDICTIMYTSGTTGDPK
GVLISNESIITLLAGVKRLLESVNEELDTNDVYLSFLPLAHIFDRVIEELFIWTGASIGF
WRGDVKLLTEDIAELKPTIFCAVPRVLDRIYAGLTQRISSGGIIKKTLFNCAYTYKHYNM
KNGHAHGDASPMSDKIVFSKVKQGLGGRVRLILSGAAPLSTHVESYLRVVACAHVLQGYG
LTETCAGTFVSLPNEMSMLGTVGPPVPNVDVCLESVPEMGYDALAETARGEVCVRGKTLF
SGYYKREDLTKEVMIDGWFHTGDIGEWQQDGSLKIIDRKKNIFKLSQGEYVAVENLENIY
GLVSDIDAIWVYGNSFESCLVAVVNPNKQAIERWAQQNDVSGDFNSLCENAKVKEYVLGE
LNKIAKDKKLKGFEVIKAVHLDPEPFDMERDLITPTYKKKRPQLLKYYKSVIDDMYKSVN
QPKPKA
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcggggactaagtacaagtacctgatcgaggtcgagaaggggaaaccggccaaggac
ggcaggccgtcgctcggtccggtttaccggagcgtcttcgctaaagacggatttccgccg
ccgattgccggaatggacagctgctgggacgttttccgcatgtcggtggagaagaatccc
gggaaccgaatgcttggtcgtcgcgagactgtgaatgggaaggctggtgaatatgtgtgg
ttaacttacaaacaagtatatgacattgtggtaaaagttggaaattccatgcgcactctt
ggcttggtagaaggggacaaatgtggtatatttggtgccaattgcccagaatggataatg
agcatggaggcttgcaatgctcatgggctctattgtgttcctttatatgacactctaggt
gctggtgctgtggagtttatcatatgccatgctgaagtttcacttgcttttgtagaagaa
aaaaagatacctgagctgttgaagacacttcccaacgcgtcaaaatatctaaagacactt
gtaagctttggcaatgttactcctgaacaaaaggaatcagttgaaaagcatggatctgtc
ttatattcatggaatgaatttctgcaactgggagagagtaaagattttgatcttccagta
aaaaagaaaagtgatatctgtactataatgtatactagtggaacaactggtgaccccaag
ggtgtactgatatccaatgaaagcatcatcactctactggctggggtgaaacgcctgctg
gagagtgtaaatgaagagttggacacgaacgatgtatatctttcctttcttcctcttgca
catatctttgatcgggttatcgaggagttatttatctggactggtgcctcaatagggttc
tggcgtggggatgtcaaattattaactgaagacatagcagagctaaaaccaactattttt
tgtgctgttcctcgcgtcttagatagaatctatgcaggcttgacacagaggatttcatca
ggcggcatcataaaaaagacgctgttcaattgtgcgtatacatacaagcattataacatg
aaaaatgggcatgcacatggggatgcatctccaatgtctgacaagattgtgtttagtaag
gtaaagcaaggattggggggtagggtgcggctcattctgtctggagctgctcctctttct
actcatgtggaatcttacttacgtgtggtcgcatgcgctcatgttttacaaggatatggt
ctgacagaaacttgtgctgggactttcgtatcactaccaaatgaaatgtccatgcttggc
acagttggtcctccggttccaaatgtggatgtatgtctagaatctgtacctgaaatggga
tatgacgctctggctgagacagctcgtggagaagtatgtgtaagaggaaaaactttgttt
tcaggatactacaaacgcgaggacctcacgaaagaggtcatgattgatgggtggttccat
acaggggatattggtgagtggcaacaagatggaagcctcaaaatcattgatcgtaagaag
aatatcttcaagctttcacaaggagagtatgtagcagttgaaaacttggaaaatatttat
ggacttgtttcagatattgatgcgatatgggtttatgggaacagctttgagtcctgcctg
gttgcagttgtcaaccccaacaagcaagcaattgaacgttgggctcaacaaaatgatgta
tctggtgacttcaattctctttgtgaaaatgcaaaggtgaaagaatacgtgcttggagag
ctgaataagattgcgaaagacaaaaagttgaaaggttttgaggttataaaagctgttcac
cttgacccagaaccattcgacatggagcgcgaccttatcactccaacatacaagaaaaag
aggccccagttgcttaaatactacaagagtgtgattgatgacatgtacaagagtgtaaac
caacccaagcctaaggcctga
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