KEGG   Fragaria vesca (woodland strawberry): 101313661
Entry
101313661         CDS       T02666                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fve04121]
    101313661
Enzymes [BR:fve01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     101313661
Ubiquitin system [BR:fve04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    101313661
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_5 zf-C3HC4_4 zf-rbx1 Prok-RING_4 zf-ANAPC11 zf-Nse zf-RING_10 zf-RING_4 Rtf2 TRAF3_RING Sina_RING RING_XB3-XBAT31 Zn_ribbon_RlmA
Other DBs
NCBI-GeneID: 101313661
NCBI-ProteinID: XP_004290190
LinkDB
Position
LG2:complement(9281764..9285434)
AA seq 212 aa
MSARPMVPRVVRTRPPARTGLRQRKNELDLNSAPPGVNQNQEGTSAQVLPQIERPNQSPL
VIDLEATDDDVVICSPRAVSEARNNSRRNRSRHVVDLESDVTRANCQKRRRVEPNRTIIN
CELYINLEGNSNSNSKNEQAMQPPPPPPPPKEPTFTCPICMAPLVEEMSTKCGHIFCKKC
IKAAITAQGKCPTCRRKVTAKELIRVFLPTSS
NT seq 639 nt   +upstreamnt  +downstreamnt
atgagcgctcgacccatggtccctcgggtagtaaggacccgccctcctgcaagaactggg
ctcaggcaaaggaagaatgaattggatctcaatagtgcaccacctggtgtgaatcagaat
caggagggaacttcagctcaggtgttacctcagattgagagacctaaccagtcaccattg
gtgattgatcttgaggctactgatgatgatgttgtcatatgttctcccagagctgtttcc
gaagctagaaacaactccagaaggaaccgatcaaggcatgtggttgatttggaatcagat
gtgactagggccaattgtcaaaagcgcagaagagttgagccaaatcgaacaatcattaat
tgcgagctttacataaacttggagggcaatagcaactccaattcaaagaatgagcaggct
atgcagccaccaccgccaccaccaccaccaaaggagcccacctttacatgtcccatctgc
atggctccgttggtcgaggagatgtcaacaaaatgtggtcacattttttgtaagaaatgt
atcaaggctgcgataactgctcagggaaaatgtcctacctgtaggagaaaagtaactgcg
aaagagcttattagggtattccttcctacttcctcctga

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