Fragaria vesca (woodland strawberry): 101313774
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Entry
101313774 CDS
T02666
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101313774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101313774
Spliceosome [BR:
fve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
101313774
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101313774
NCBI-ProteinID:
XP_011460029
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Position
LG3:complement(1018347..1022387)
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AA seq
534 aa
AA seq
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MGSKREREDNEGEGELLESKRQNVSELESPDSSPPASLLPGFHYGDEDEEERKAPVNGKE
LVAGLNGAPVEEEEEDDDGEQGLYQGHRSREIEIRRDCPYLDAVNRQVLDFDFEKFCSLS
LSNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVFINLRTEKVYCLPDGYEISDPSLD
DIRHVLNPRFTEEQVEQIDKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVTIQSLMRVT
PLRNFFLIPKNYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKRFRIG
AQSDPVEFMSWMLNTLHRDLKTKKNTSIIYDCFQGELEVVKESYENTDGETEHRSLVTTT
SRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGETVTEVVRPRIERKRFCIT
RLPRYLILHMQRFTKNNFFVEKNPTLVNFPVKNLELRDYIPLPTPNENERLRSKYDLIGN
IVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVSETLPQMVALSEAYMQIYEQQQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgaagagagaacgtgaagataatgaaggggaaggggagttgttggagtcaaag
aggcagaatgtgagtgagctagagtcgccggactcttcgccgcctgcctctcttcttcct
ggttttcattatggggacgaggatgaggaggagcgaaaggcaccggttaatggtaaggag
ctagtggctggactgaatggggctccggttgaggaagaagaagaggatgatgatggtgaa
caaggactgtatcaagggcaccggagccgcgaaatcgaaatcaggagggattgcccctat
ctcgacgctgttaatcgccaggttttggattttgattttgagaagttttgctcgctttct
ctgtcgaacttgaacgtgtatgcgtgtttggtatgtgggaagtattaccaaggaagagga
aggaagtcgcacgcgtatactcatagccttgaagcaggacaccatgtgttcattaatctt
cgaacggagaaggtttattgccttcctgatggatatgagattagtgacccatcattggat
gacattcgacatgttctgaacccaaggtttactgaggaacaggttgagcagattgacaaa
aacaagcagtggtctagggcacttgatggttctgattaccttcctggaatggtggggcta
aataacattaaggagaccgattttgtgaacgtcactattcaatccttaatgagagttaca
cctctaagaaacttctttcttatcccaaagaactatcaacattgcaagtctccgcttgtt
catcgatttggggagcttacaagaaaaatatggcatgcacgaaacttcaaaggacaggtg
agcccacatgagttcctgcaggccgttatgaaagccagtaagaaacggtttagaatagga
gcgcagtctgatcctgttgagtttatgtcatggatgctcaatacacttcacagagatctt
aaaactaagaagaataccagcatcatttatgactgctttcagggggaactagaggttgtc
aaggaaagctatgagaatacagatggagaaactgaacacaggagccttgtcacaacaact
tccagaatgcctttcttaatgcttggattggatttgcccccaccaccactttttaaagat
gtgatggagaaaaacatcataccacaggtcccgctgttcaacattctgaaaaaatttgat
ggtgagactgttactgaagtcgttcggcctcgaatagaaaggaagaggttttgcatcacc
agattgccgcggtatcttattctgcacatgcaaagattcacaaagaacaacttctttgtg
gagaagaatcccactttagtcaactttcctgtgaagaacctggaattaagagattacatc
cctttgccaacccccaacgagaatgagagattgcgttcaaagtatgatttgattggcaat
attgttcatgatggtaaacctggtgaagggtcctacagagtatttgtacagcgaaagtcg
gaagaattatggtatgagatgcaggatcttcatgtctctgaaacacttcctcagatggtt
gccctttccgaggcttatatgcagatatatgagcagcaacagtaa
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