Fragaria vesca (woodland strawberry): 101313789
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Entry
101313789 CDS
T02666
Name
(RefSeq) transcription factor IIIB 90 kDa subunit-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101313789
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
101313789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
DUF6017
ParD_antitoxin
BRF2-like_C_cyclin_rpt
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
101313789
NCBI-ProteinID:
XP_004296706
LinkDB
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Position
LG4:7874057..7886544
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AA seq
620 aa
AA seq
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MVWCSACVKNVEGTSDAGRLWCSGCGKVLEDHIFSEEPTFVKNAAGQSQLAGRYVRSRES
EISASRERILENAEYELRCMRNALDMGDNEEIIDIAKRFYRIAIERNFTRGRKSEQVQAA
CLYIACREKKKPYLLIDFSNYLKINVYVLGAVFLQLCKALRLDEHPIVQKLVDPSWFIHR
FTESLPGGRDKGVMQTAHRIITSMKRDWMQTGRKPSGICGAALYISALSHGLKCSKSDII
KIVHVCDATLTKRLVEFENTESGSLTIEEFLLKAKELDEISKQPIMADKMDDTDSSPSEQ
RILCEHKDSGKPYAHGLCQICYDDFMTISGGLDGGANPPAFQRAEIERLKKTSAELNAND
SGIDTIASESLDNSNQLSQFEKENNTKSGSKNKGLLPTEPVSDGAAMENTADDIGTEDCD
DESDNFSDIDDLEVDGYLLNEEGQRYKKMIWEEMNREYIEEQAAKEEAAKAAMDINCPEG
AKKLAQITEAAVAKRKKERQLARAAEAKNSTPAQTAAEAVHQMLTKKRLSSKINFDVLED
MFETSEGPDVSKKRKIDSHLDNDNKMPHDSEELKYDAYKDDDLGMEQEYGDEEGLEDIGY
NNHDYVEEADEYNDRDYDDF
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggtatggtgttctgcctgtgtcaaaaacgttgaaggaaccagcgatgctggtagacta
tggtgttccggatgtggcaaggttttagaggatcacattttctctgaggaacccactttc
gtcaagaatgccgccggccagagccaattggctggaagatatgtgcgctccagggaaagc
gaaatctctgcttctcgtgaaaggatcctcgaaaacgctgaatatgaattgagatgtatg
aggaatgctttagatatgggagacaatgaagaaattattgacatagctaaacgcttttat
agaattgcgattgagcggaattttacaagggggcgcaagtcagagcaagtacaggccgca
tgtctttacattgcatgtcgggaaaagaagaagccataccttctcatcgatttttctaac
tacttgaagataaatgtctatgtgctaggagctgtgtttttgcaactttgcaaggctttg
aggcttgatgagcacccgattgttcaaaaacttgttgatccttcttggtttattcatagg
ttcactgagagtttacccggaggaagggataaaggggttatgcaaactgcacaccggatt
atcacaagcatgaaacgggattggatgcagacaggcagaaaaccaagtggaatatgtggt
gctgcattatatatatcagcactttcacatggtctcaagtgctccaagtctgatattatc
aaaattgtacatgtctgtgatgctacattgactaagcgactggttgaatttgagaataca
gaatctgggagcttgacgattgaagagttcctcttgaaggctaaggaactggatgaaata
agcaaacaaccaattatggctgataaaatggatgacacagatagtagcccttctgaacag
aggatcctttgcgaacataaggatagtggaaaaccttatgcacatggactttgtcaaatc
tgttatgatgattttatgacaatttcaggtggacttgacggaggggctaatcctccagct
ttccagcgtgctgaaatagagagattgaaaaaaacatctgcggagctaaatgctaatgac
tctggcatcgacaccattgcttctgaaagccttgacaacagtaatcagttatcccagttt
gagaaagagaataacacaaaatcaggaagcaagaacaaaggactgctgcctacggagcct
gtaagtgatggggctgctatggagaatacagctgatgacattggaactgaagattgtgat
gatgagtctgacaacttttcagatattgatgatctggaggttgatggctaccttcttaat
gaagaggggcaacgctataaaaagatgatttgggaagaaatgaaccgtgagtacattgag
gagcaagcagcgaaggaggaagcagctaaggctgctatggatatcaattgtccagaaggt
gcaaagaaacttgcacaaattactgaagcagctgttgccaagagaaaaaaggagaggcaa
ctagctagagcagctgaagcgaaaaactctactccagctcagactgctgcagaagctgtc
caccaaatgctgactaagaagagactcagctcaaaaatcaactttgatgttctggaggat
atgttcgaaacatctgagggtcctgatgtctccaagaaaagaaaaattgattcacatctt
gacaatgacaacaagatgccccatgacagtgaagaacttaaatatgatgcatacaaagat
gatgatttgggtatggaacaggaatatggggatgaagaaggacttgaagacataggctac
aacaatcatgattatgttgaggaagcagatgagtacaatgatcgagattatgatgatttc
tga
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