KEGG   Fragaria vesca (woodland strawberry): 101313790
Entry
101313790         CDS       T02666                                 
Name
(RefSeq) LEC14B homolog
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fve04121]
    101313790
Ubiquitin system [BR:fve04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101313790
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_SPT8 WDR54 Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 101313790
NCBI-ProteinID: XP_004296776
LinkDB
Position
LG4:complement(9977225..9983058)
AA seq 474 aa
MSYRRRFGKDNSACDSGNDVEGSASGEEANEASKSLDHEVAHLTKLKSRPHQHLRGVLPG
KLRLPVSTLKMLMGRESNYSGRGRFSSADACHVLSRYLPVNGPWGVDQSNSPAYVSQFSN
NGLFFVAGFQGGHIRIYDVEKGWTIQKDIRTKSLRWTITDTSLSPDQRNLAYASMSPIVH
IVNAGSSTTESVANITEVHEGLDFSVDYDDEEFGIFSVKFSTDGRELVAGSSDASIHVYD
LQANKVSLNIPAHTSDVNTVCFADETGHLIFSGSDDNLCKVWDRRCFVTKGQAAGVLMGH
QEGITFIDSRGDGRYLISNGKDQTTKLWDIRKMSSRNLYPRITDHDWDYRWMEYPGHLRT
SKHPFDQSLATFRDHSVLRTLIRCYFSPAYSTGQKYIYTGSSDHAVYIYDLVTGAQVAKL
VHHDEPVRDCSWHPTYPMLVSSSWDGSIARWEFPGDDQVPTVVKPRVRRRRAFY
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagttacagaaggaggtttgggaaagataatagtgcctgtgatagtggaaatgatgtt
gaaggttctgcttcaggtgaagaagccaacgaagcatcaaagagtcttgatcatgaagtg
gctcacctcacaaagcttaaatcaagaccccatcagcatttgaggggggttttgcccgga
aagttgaggttgccggtatcaacactgaaaatgttgatgggccgtgagagtaattattcg
ggacgagggaggttttcatcagcggatgcttgtcatgttttaagtcggtatctgcccgtt
aatggtccctggggggtggaccagtcaaatagccctgcatatgtttctcagttttcgaac
aatggcttgttttttgttgctgggtttcagggaggccatattagaatatatgatgttgaa
aagggatggacaattcagaaggacattcgaaccaaaagcttgagatggacaattactgat
acatctctatcaccagatcaacgaaatcttgcatatgctagcatgtcacctattgtccat
attgtcaatgctggatcttctacgacagagtcagttgcaaacattacggaagtacatgaa
ggtctcgatttttctgttgattatgatgatgaagaatttggaatattctctgttaaattt
tcaactgatggaagagagcttgtggctggaagtagtgatgcttcaatacatgtttatgat
ctccaagcaaacaaagttagcctcaacataccagcacacacgtcagatgtaaacacagta
tgctttgcagatgagactggccatcttatattttccggcagtgatgataacctctgtaag
gtgtgggatagacgctgctttgtcacgaaagggcaagcagccggggttctgatgggacat
caggaaggcataacgtttattgatagtcggggagatgggcgttacttaatatcaaatggg
aaggatcagactaccaaactttgggatatacggaagatgtcctctagaaatttgtatcca
aggattacagatcatgactgggattacagatggatggagtacccaggtcatttaagaact
tctaaacatccctttgatcagtccttggctacatttagagaccattcagtcctgcgcact
ttaattcgctgctacttttctccagcatatagcactggacaaaagtacatttacactgga
tctagtgatcatgcagtctatatttatgatctggtgactggtgctcaagttgcaaaactc
gtccatcatgatgaaccggtaagagattgtagttggcatcctacttatcccatgctggtc
agttcatcctgggatggaagtatcgcgagatgggagtttcctggagatgatcaagttcct
acagtggtaaagccaagagtaaggcggaggagggctttctattga

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