Fragaria vesca (woodland strawberry): 101313790
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Entry
101313790 CDS
T02666
Name
(RefSeq) LEC14B homolog
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101313790
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101313790
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
WDR54
Beta-prop_NUP159_NUP214
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
101313790
NCBI-ProteinID:
XP_004296776
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Position
LG4:complement(9977225..9983058)
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AA seq
474 aa
AA seq
DB search
MSYRRRFGKDNSACDSGNDVEGSASGEEANEASKSLDHEVAHLTKLKSRPHQHLRGVLPG
KLRLPVSTLKMLMGRESNYSGRGRFSSADACHVLSRYLPVNGPWGVDQSNSPAYVSQFSN
NGLFFVAGFQGGHIRIYDVEKGWTIQKDIRTKSLRWTITDTSLSPDQRNLAYASMSPIVH
IVNAGSSTTESVANITEVHEGLDFSVDYDDEEFGIFSVKFSTDGRELVAGSSDASIHVYD
LQANKVSLNIPAHTSDVNTVCFADETGHLIFSGSDDNLCKVWDRRCFVTKGQAAGVLMGH
QEGITFIDSRGDGRYLISNGKDQTTKLWDIRKMSSRNLYPRITDHDWDYRWMEYPGHLRT
SKHPFDQSLATFRDHSVLRTLIRCYFSPAYSTGQKYIYTGSSDHAVYIYDLVTGAQVAKL
VHHDEPVRDCSWHPTYPMLVSSSWDGSIARWEFPGDDQVPTVVKPRVRRRRAFY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagttacagaaggaggtttgggaaagataatagtgcctgtgatagtggaaatgatgtt
gaaggttctgcttcaggtgaagaagccaacgaagcatcaaagagtcttgatcatgaagtg
gctcacctcacaaagcttaaatcaagaccccatcagcatttgaggggggttttgcccgga
aagttgaggttgccggtatcaacactgaaaatgttgatgggccgtgagagtaattattcg
ggacgagggaggttttcatcagcggatgcttgtcatgttttaagtcggtatctgcccgtt
aatggtccctggggggtggaccagtcaaatagccctgcatatgtttctcagttttcgaac
aatggcttgttttttgttgctgggtttcagggaggccatattagaatatatgatgttgaa
aagggatggacaattcagaaggacattcgaaccaaaagcttgagatggacaattactgat
acatctctatcaccagatcaacgaaatcttgcatatgctagcatgtcacctattgtccat
attgtcaatgctggatcttctacgacagagtcagttgcaaacattacggaagtacatgaa
ggtctcgatttttctgttgattatgatgatgaagaatttggaatattctctgttaaattt
tcaactgatggaagagagcttgtggctggaagtagtgatgcttcaatacatgtttatgat
ctccaagcaaacaaagttagcctcaacataccagcacacacgtcagatgtaaacacagta
tgctttgcagatgagactggccatcttatattttccggcagtgatgataacctctgtaag
gtgtgggatagacgctgctttgtcacgaaagggcaagcagccggggttctgatgggacat
caggaaggcataacgtttattgatagtcggggagatgggcgttacttaatatcaaatggg
aaggatcagactaccaaactttgggatatacggaagatgtcctctagaaatttgtatcca
aggattacagatcatgactgggattacagatggatggagtacccaggtcatttaagaact
tctaaacatccctttgatcagtccttggctacatttagagaccattcagtcctgcgcact
ttaattcgctgctacttttctccagcatatagcactggacaaaagtacatttacactgga
tctagtgatcatgcagtctatatttatgatctggtgactggtgctcaagttgcaaaactc
gtccatcatgatgaaccggtaagagattgtagttggcatcctacttatcccatgctggtc
agttcatcctgggatggaagtatcgcgagatgggagtttcctggagatgatcaagttcct
acagtggtaaagccaagagtaaggcggaggagggctttctattga
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integrated database retrieval system