Fragaria vesca (woodland strawberry): 101313793
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Entry
101313793 CDS
T02666
Name
(RefSeq) AP-1 complex subunit gamma-2-like
KO
K12391
AP-1 complex subunit gamma-1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
101313793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101313793
Membrane trafficking [BR:
fve04131
]
Endosome - Golgi transport
Others
AP-1 complex
101313793
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
INTS1_R4
Cnd1
HEAT_GCN1
HEAT_2
INTS7_N
U9-ORF
PA28_N
Motif
Other DBs
NCBI-GeneID:
101313793
NCBI-ProteinID:
XP_004297650
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All DBs
Position
LG4:21873367..21882866
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AA seq
870 aa
AA seq
DB search
MNPFSSGTRLRDMIRAIRACKTAAEERGVVRKECAAIRAAINENDHDYRHRNLAKLMFIH
MLGYPTHFGQMECLKLIASAGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHTNQY
IVGLALCALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCSIRIIKKVPELAENFIN
PAAALLKEKHHGVLITGVQLCTDLCKISEEALEYFRLKCTEGLVKTLKDLVNSPYAPEYD
IAGITDPFLHIRLLKLLRVLGQGDEDASECMNDILAQVATKTESNKNAGNAILYECVATI
MSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMRAITVDAQAVQRHRATILECVKD
LDASIRKRALELVYVLVNETNVKPLTKELIDYLEVSDEDFKGDLTAKICSLVKKFSPEKI
WYIDQMLKVLSEAGNFVKDEVWHAVIVVITNSPDLHGYTVRALYRAIQTSADQESLVRVA
VWCIGEYGDMLVNNIGMLDVEDPITVTESDAVDIIEIALKHHTSDLTTKAMALIALLKLS
SRFPSCSERIKEIVAQYKGSLVLELQQRSIEMNSIISKHQNIRSTLVERMPTLDLLQWEE
QQSGSIPTTTSTSAHASINIPNGVAKPSSAPLVDLLDLNSDDVPAPSSSGGDFLHDLLDV
DLSKQSGVNHSPNNGTNALMDLLSIGTPTQSSSAISDLLNSGQDNKASVSPLDVLSSPSS
NSVQPTSSAGAIDLLDSFATNSPIQENNGPAYPSVVAFESSNLRIGFNFSKLPGNPQTTI
IKATFTNLSPSVYTDFIFQAAVPKFLQLHLEPASGNTLPASGNESITQTLRVTNSQHGKK
SLVMRIRIAYKMNNKDVLEEGQINNFPQGL
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttctcctccggaacgcgcctgagggacatgattcgggcaatacgtgcttgc
aaaactgcagcagaggaacgcggtgttgtaaggaaagagtgtgctgctattcgtgctgcc
ataaatgaaaatgatcatgactacaggcaccgtaacctggctaagctcatgttcatccac
atgctgggttacccaacacattttggtcaaatggagtgcctgaaattgatagcatctgct
ggttttccggagaagagaatagggtatcttggcctcatgctgcttctcgatgaaagacaa
gaagttttgatgttggtcacaaactcgttgaaacaagatctgaatcacacaaaccagtat
attgttggacttgctctttgtgctttgggaaatatttgttcagcagagatggctcgtgat
cttgcaccagaagtagaaagattgctgcaatttcgagatccaaatatccggaaaaaggca
gcattgtgctcaataaggattataaagaaagtacctgaactggcggaaaactttattaat
cctgctgctgccttacttaaagaaaagcatcatggcgttttaatcacaggagttcaactt
tgtacagatctttgtaaaatcagtgaagaagccctcgaatactttagattgaagtgcact
gagggtttggtcaagacactaaaggatctagtgaacagcccatatgctcctgagtacgac
attgctgggatcacggatcccttcctccatattagattgctgaagcttttgcgtgttttg
ggtcaaggagatgaggatgcgagtgaatgtatgaatgacatacttgcccaggtggctaca
aaaactgagtcaaacaaaaatgcagggaatgcaattctatacgaatgtgtggcaactata
atgagcatcgaagataatggtggcttacgtgtgcttgccatcaatattttgggaagattc
ttatcgaatcgtgacaacaatatcagatatgttgcgttaaacatgctgatgagagccatt
acagttgatgctcaagctgtacagaggcatcgggcaactatcttggaatgtgtaaaggat
ttagatgcttcaattcgtaaaagggcccttgaacttgtttatgtccttgtgaatgaaact
aacgtgaaacctctaacaaaagagctcattgattatttggaagtaagtgatgaagatttc
aagggagatcttacagcgaaaatttgctctcttgtcaagaagttttcccctgagaagatt
tggtacattgatcagatgctcaaggttctctccgaggctggaaattttgtaaaagatgaa
gtatggcatgcggttattgttgtgataacaaattcacctgatcttcatgggtatacggtt
agggctttatacagagcaatccaaacatcagcggatcaggaaagcttggtccgagtagca
gtttggtgcatcggagaatacggtgacatgttggtaaataatattggcatgcttgatgtt
gaggatcccataacagtaacagagtctgatgctgtggatatcatagaaattgcccttaag
caccatacctcggatcttactaccaaggctatggctctgattgctctcttaaagctatct
tcacgtttcccatcttgttcagagaggatcaaagaaattgtagctcagtataaaggaagc
cttgtgcttgaactgcagcaaagatccattgaaatgaattctattatctcgaagcatcag
aacattagatctacactggttgagaggatgccaactttggatttgttacagtgggaggaa
cagcagagtggttctataccaactactacatcaacttctgctcatgcttcaatcaacata
ccaaatggagttgccaaaccttcttcagctcctcttgtggatttacttgatctaaattca
gatgatgtgccggcccctagctcctctggtggtgattttcttcatgatcttctcgatgtt
gatttgtcgaaacaatcgggtgtgaatcattctccaaacaatggcaccaatgctttaatg
gatctcttgtctattggtacgcctacacaaagtagctcagctatctctgatctgttaaat
tctggtcaagataacaaagcatctgtttcaccattagatgtactatcatctccatcttcg
aactccgtacaacccacttcttctgctggagcgattgatttgttggacagctttgcgacc
aactccccaatacaagaaaacaatggccctgcttatccatctgtagttgcatttgagagt
agcaatttgaggatagggtttaacttttcgaagctgcctggaaatccacaaacgacaata
atcaaggctacattcactaatttgtcaccgagtgtctatacagattttatttttcaggca
gctgttccaaagtttctacaactgcacttggagccagctagcggcaatactcttccggca
agtggtaacgagtccattacacaaactttgagagttaccaatagccaacatggaaagaaa
agtctcgtcatgcgcataaggatagcttacaagatgaacaacaaagatgttttggaggaa
ggacagatcaacaattttccccagggcttatga
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