Fragaria vesca (woodland strawberry): 101313812
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Entry
101313812 CDS
T02666
Name
(RefSeq) protein STICHEL
Organism
fve
Fragaria vesca (woodland strawberry)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DnaA_N-like_STI
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_22
RCF1-5-like_lid
AAA_16
AAA_14
ResIII
AAA_30
AAA_18
HMUDK_HMUD1
LRR_9
Phage_tudor
RuvB_N
Motif
Other DBs
NCBI-GeneID:
101313812
NCBI-ProteinID:
XP_004301580
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Position
LG5:complement(18115990..18123362)
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AA seq
1217 aa
AA seq
DB search
MSVAAMGVSDPSQLHLKKELTQIRKAARLLRDPGTTASWRSPLPSSRSAAGPAGAGALPS
ACSTSNGGGDSKKVFLYNWKGSSKSSRNDDYEDDDEDEDYGVEEEDEASSVAALSVDDTL
SHGGDSRSETGGGQSRSLMMLRRRYPNLLPPIKDGGKKGSKSHSHVLSKYQQKELILGRN
LRKGEQSDDTEDYSNSEIRGASPLLLKLRHKHWPPASSNVRRNDSRAEDSSYCYSTPALS
TSSYNRYGVRNPSTVGSWDGTATSMNDGDDEVEDRLDFPGSKGCGIPCYWSKKTPKHRGM
YGSCCSPSLSDTIRRKGSVLLCGSQNVYPRRRGSSSGSNKRRIASRSAQGVLPLLNNSGD
GRGGSSIGTGRSDDELSTNFGELDLEALSRLDGRRWSSSCRSQEGLEIVALNGVGEEGST
PESVTSFSQKYKPMFFRELIGQNIVVQSLINAIGRCRIAPVYLFQGPRGTGKTSTARIFA
ASLNCLAPDETKPCGYCRECTDFMSGKNKDLLEVDGTNKKGIDKVRYLLKTLSVAPSSAS
SRYKVFVIDECHLLPSKTWLAFLKYLEEPPERVVFIFVTTDLDNVPRTIQSRCQKYLFNK
IKDSEIVARLRKIAVQENLDVEPDALDLIALNADGSLRDAETMLDQLSLLGKRISTSLVN
ELVGVVSDDKLLELLELAMSSDTAETVKRARDLMDSGVDPMVLMSQLASLIMDIIAGTNS
TNDVKHDSLYGAQNLTEAELERLKHALKILSEAEKQLRVSSERSTWFTATLLQLGSLPSP
DLSHSCSRRHSCKTTEDGSSSASTSREAATYKQKLDGHYMLQKSTHNSVQRAPNENSNHR
GDSLSRNSGFGVNPKPSHDQFVDSGASTPLCGNVMAGNMSLSCVNSEKLNDIWAQCIEKC
HSKTLRQLLHSHGKLVSISEAEAEGVLVAYVAFEDGSIKSRAERFVSSITNSMEIVLRRN
VEVRIVHLPGGEASLNCPSPVHLLEGLKQAELVRERKRVGSNATDGYSNCSLFLDGTHKS
TSDSSDLVADGNAQTSDTRESRQEIPMQRIESIIRDQRLETAWLQVVEKGTPGSLSRSKP
EKNQVLPQEGIYYEDQMESINLMGLSSQQWDDGLNHEVKILRANSGKVVQQDQIGKRVDH
YPMSPSLLHEKGKSDKDNLGDESGSGRGGCSGFFRCYDTRRRKRGKVKGTPVQPRKGRQF
SLFGVCGKSRKTAEKTR
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtagcagcaatgggggtgtctgatccaagccaactccacttgaagaaggagcta
acccagattcgaaaagccgcccgccttctccgcgatccggggaccactgcctcctggcgg
tcccctcttccttcctctagatccgcggcgggtccggcgggtgcgggagcccttccttct
gcctgttccacttccaacggaggcggcgacagtaagaaggtgttcttgtacaactggaag
ggctcttccaagtcgtcgaggaatgatgactacgaagacgatgatgaggatgaagattat
ggtgttgaagaggaggacgaagcctcttcagttgcggcattgagtgtggatgacaccttg
agccacggaggagattccaggagtgaaactgggggtggtcagagccggtcattgatgatg
ctgcggcgcaggtatccgaatctcctgccgccgatcaaggatggtggtaagaaaggaagc
aagtcacattctcatgttttgtcgaaatatcagcagaaagagttgattcttggcaggaac
ttgaggaagggcgagcagtctgatgacactgaggattactctaattcggagattagaggg
gcttccccgttgctgttgaagcttaggcacaagcattggcctccggcctcgagtaatgtt
aggaggaatgatagtagagcagaggactcttcttattgctatagcactcctgcattgtcg
actagctcttataataggtatggtgttcggaatccgagtaccgttggatcttgggatgga
actgcaacttcaatgaatgatggggatgatgaggttgaggatcgtttggattttccgggt
agcaagggatgtgggattccttgttattggtctaaaaagacacctaagcacagaggcatg
tatggaagctgttgctccccttcactttctgatactataaggagaaaaggaagtgtcctt
ttgtgtgggagtcaaaatgtttatcctagacgacgggggtcttcgtcaggttccaataag
cggagaattgcatctagaagtgcccaaggtgttctgccattgctaaacaatagtggtgat
ggtaggggagggtcatccataggaactgggaggagtgatgacgaactttccacaaacttt
ggggagcttgatttggaagctttgagtagattagatgggcggagatggtcatcaagctgc
cgaagtcaagaaggcttggagattgtagctctgaatggagtgggggaagagggaagcact
ccagagagtgttacaagttttagccagaagtacaagcccatgttctttcgtgaattgatt
ggccagaatattgtggtgcaatcacttatcaatgctattggtaggtgcaggattgctcct
gtttatcttttccagggaccccgtggaactggaaaaacgtcgacagctagaatttttgct
gcttccttgaactgcctagctcctgatgaaactaaaccctgtggctactgtagggagtgc
actgattttatgtctggtaagaacaaagatctattggaagttgatggtaccaataagaaa
ggaattgataaagttaggtacctattgaaaactctatctgtggctccctcatcagcatca
tcaaggtataaggtttttgtgattgatgagtgtcacttactgccttccaagacatggttg
gcatttcttaaatatttggaagaaccaccggagcgagttgtctttatattcgttacaact
gatttggataatgttcctcgtactattcaatctcggtgtcagaaatatctcttcaacaaa
attaaggatagtgagattgtggccaggttgaggaaaattgctgttcaagagaacctagat
gttgaaccagatgctttagatttgattgctctgaatgcagatggttcacttcgagatgca
gaaactatgttggaccagttgagtttgctggggaaaagaatctcaacgtctcttgtgaat
gaacttgtgggagttgtttccgatgacaagttactagaacttttggagttagcgatgtca
tcggacactgcagaaacagtgaaaagggccagagatttgatggactctggggtcgatccc
atggttttgatgtctcagttggccagcctaattatggatatcattgcgggaaccaacagt
accaatgatgtcaaacatgactccttatatggcgcccagaacttgaccgaagcagaattg
gagagattaaaacatgctttgaagattctttcggaggctgaaaaacagcttagagtttca
agcgagcgctcaacatggtttacagcaactctgttgcagcttggttcattgccttcccca
gaccttagtcactcatgcagcagaaggcatagctgcaagacaaccgaggatggttcttca
agtgcttcaacttcaagagaagctgccacttacaaacaaaagttagacggtcactatatg
cttcaaaaatcgactcataattctgtacaaagagcaccaaatgaaaattccaaccatcgg
ggcgattcattgtcaagaaatagtggttttggtgtgaatcccaagccctcacatgatcag
ttcgtggatagtggtgcctcaactcccttgtgtggaaatgttatggctggaaatatgagc
cttagttgtgtaaactctgaaaagttaaatgatatctgggcacagtgtatcgagaagtgt
cattcaaagacgttgaggcagctgctacattctcatggaaagctagtgtcaatatctgaa
gccgaagctgaaggtgttctggttgcttatgttgcatttgaagatggaagtatcaaatct
agagcagagagatttgtgagcagtatcacgaattcaatggaaatagttctcaggcgcaac
gtagaggttagaattgtccacttgccaggtggggaggcttctctaaattgtccaagtcca
gttcacttgctggaaggtctaaagcaggcagaacttgtcagggaaaggaaacgagttggt
tcaaatgccacagatggttattccaattgttctctgtttctggatgggacccacaagtca
acctctgattcatcagacttagtcgctgatggcaatgctcaaacaagtgatacaagagag
agcagacaggagatcccaatgcagagaattgaatccattattcgtgaccaaaggttagaa
actgcgtggctacaggttgtagagaaaggcactcctggttcgttgagtcgttcgaaacct
gaaaaaaatcaagtcctgcctcaggagggcatttattacgaagatcagatggaatcaata
aatttaatgggattatcctctcagcaatgggatgatggattaaaccatgaagtaaaaatt
ttgagagctaacagtgggaaggtcgttcaacaggaccaaatcggtaaaagggttgatcat
tatcctatgtcaccaagtttactacatgagaagggcaagtctgataaagataacctgggc
gatgaatcagggtcaggtagaggaggttgcagcggattttttcgatgttatgacaccaga
cgtcgtaaaagagggaaggtaaaagggacccctgttcaaccacggaaaggtagacagttt
tcattgtttggtgtgtgtgggaagtcaaggaagacagcagagaagacaagataa
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