Fragaria vesca (woodland strawberry): 101313824
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Entry
101313824 CDS
T02666
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101313824
Enzymes [BR:
fve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
101313824
Transfer RNA biogenesis [BR:
fve03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
101313824
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
FAD-oxidase_C
PepSY_2
Motif
Other DBs
NCBI-GeneID:
101313824
NCBI-ProteinID:
XP_004305201
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Position
LG6:8961902..8968987
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AA seq
791 aa
AA seq
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MAVPAVSSCAIFRSAASPTLFAFRCCPCHFQFRRFSNFAIRFPPSWSGKLSPGHGAAQTS
SVHSLVDSVMEELEYLRSRRLRASVKVVLTSNGEVLEDKLVSRTLQKGVLLEFKKDAERV
LLAVAQKPDGKKNWMVSDQNGVTSSIKPQQITYIVPGVENFDHAEISDFVQKAKENLDPA
LLEFAWVELLEKNKRVKVEELAEMIFGSVESLECYCAHLLLSEDEIYFTVLETKGSRSIY
GPRPAEQVEELLRRKLAKEAAEKEQQEFVTLLKAAKAMPLDAKPPKSSWMVEEKIKHRIE
SLERYAIDDCKTDDQRKTAGTILKAMGMVKTASSALNLLIDIGYFPVHVNLDLLKFNIHT
DHSDEVISAAESLLSDPTDPDEIERKDLTHLKVYAIDVDEADELDDALSATRLQHGRIKI
WIHVADPTRLVQPGSILDREAMRRGTSVFLPTATYPMFPEKLAMEGMSLQQGEICNAVTV
SVVLHSDGSIAEYSVDSSIIRPTYMLTYESASELLHLNLEEESELKMLSEAATLRRRWRH
EQGGIDTATLEARIKVVNPEDPEPVINLYVEDQADPAMRLVSEMMILCGEVIATFGCSNN
IPLPYRGQPQSNIDTSVFAHLPEGPVRSSALVKIMRAAEIDFRKPLRHGILGLPGYVQFT
SPIRRYLDLLAHYQIKAFLIGDSPPFSASQLEGIASIVNMNTRVAKRLFNSSLRYWILEY
LRRQPKEKRFRALILRFIKDRIAALLLVEVGLQASVWVSVGSQIGDEVLVRVDEAHPRDD
VLFLKEVVIDR
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccagccgtcagctcctgcgcaatcttccgctccgccgcttctcctactctc
ttcgccttccgctgctgcccttgccacttccaattccgccgcttctccaacttcgctatc
cgcttcccgccgtcttggtccggcaagctctctcccggccatggcgccgctcagaccagc
tccgtccacagcctcgtcgattctgtcatggaagagctcgagtacttgcgctcaagaaga
ctccgcgcctccgtcaaggtggtactcacaagcaatggagaggtactagaggataagctt
gtgagccggacactccaaaaaggggtgctgcttgagttcaagaaggatgctgaaagagtg
ttgctagccgttgctcagaagcccgacggcaagaagaactggatggtgtccgatcagaat
ggtgttacatcatccatcaaaccgcaacaaattacatatattgttcctggtgttgaaaat
tttgaccacgcagagatatcagactttgttcagaaagctaaggaaaacttggatccagca
ctgttagaatttgcttgggttgaactccttgaaaagaataagcgggtcaaggtggaagaa
ttagcagagatgatatttggtagtgtggagtcccttgaatgctactgcgctcatcttttg
ctttcagaagacgaaatatacttcactgtcctggagacaaaaggttctcgctctatatat
ggacctcgacctgctgagcaggttgaggaacttctacgtaggaagcttgcaaaggaggct
gctgagaaagagcagcaggagtttgtaaccctgctgaaagctgcgaaggctatgccttta
gatgctaaacctcccaagtcttcttggatggttgaagagaaaatcaaacacaggattgag
tctcttgaacgttatgctattgatgactgcaaaaccgatgaccaaaggaaaacagctgga
acaatcctaaaagcaatgggaatggtgaaaacagcatcatcagctctgaatctcctcatc
gacattgggtatttccctgtacatgtgaatttggacttattgaagttcaacattcatacg
gatcattcagatgaagttatatcagctgcagaaagtcttctgtctgatccaacagatcca
gatgagattgaaaggaaagatctcactcacttgaaggtctatgctattgatgtggatgag
gctgatgagcttgatgatgccttaagtgcaacgaggctgcaacatggacgcattaaaata
tggattcatgttgcagacccgactaggcttgttcaacctgggagcatcctagacagggag
gctatgagaagaggaacttccgtcttcttgcctactgctacttatcccatgttcccagaa
aaacttgccatggagggaatgagtttgcagcaaggagagatttgcaatgctgttacagtt
tctgttgtgctgcactctgatggcagtattgcagaatattcagtggacagctccatcatt
agaccaacatatatgctaacgtatgaaagtgcatctgagcttcttcatttgaacctggaa
gaagagtctgaactgaaaatgttgtctgaggctgcaactctccgaagaagatggcgtcac
gaacagggtggcattgatactgccacattggaagcacgcataaaagtcgtgaatccagag
gatccagaacctgtaataaatctctatgttgaggaccaggctgaccctgcaatgcgactg
gtctctgagatgatgatactctgtggagaagttatagctacttttggttgtagcaataac
attcctttaccatacaggggacagccccaatccaacattgacacatctgtatttgcccat
cttccagaaggacctgttagaagctctgcccttgtcaaaataatgcgtgctgctgaaata
gatttcaggaaacctctacgccatggaattttaggacttcctgggtatgttcaatttaca
tctcccatccgcagatatctggatctactagctcattatcagatcaaagcttttcttatt
ggagattctcctcctttctcagctagtcagttggaagggatagcgtctatagtgaacatg
aatactagagtagcaaagcggctctttaacagcagtctgcggtattggatattagagtat
ctgagaaggcagccaaaagaaaaaagattccgtgcattgattcttagattcattaaggat
cgcattgcagccttattattagttgaggtgggacttcaagcatctgtgtgggtgtctgtg
ggatcacaaattggagatgaagttctggttcgggtagatgaagctcatccacgtgatgat
gtgctttttctcaaagaggtggtcattgatagataa
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