Fragaria vesca (woodland strawberry): 101313826
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Entry
101313826 CDS
T02666
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101313826
Enzymes [BR:
fve01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
101313826
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Other ribosome biogenesis factors
101313826
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Ubie_methyltran
Methyltransf_31
FtsJ
PCMT
RrnaAD
Methyltransf_4
RsmF-B_ferredox
AcetylCoA_hydro
z-alpha
Motif
Other DBs
NCBI-GeneID:
101313826
NCBI-ProteinID:
XP_004305622
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Position
LG6:complement(21030544..21033516)
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AA seq
499 aa
AA seq
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MARTRVAATPPSTAGEKSETRRRLSMERSALFARREAAKVLKQILQGDSRRRSVGSIKSL
VYSPSVRNKKGTFALVCETLKHLKIIKQVLNAADVLNSKWRKQDELVYIVTYDILFGKVT
SSTGDAERFLLLRKGALQAALDRLLVKKKVKSVEELIALDQTPEISKPRYVRVNTLKIDV
NTALFELQKQYKVQKDDLLPDLLILPPSSDLHDHPLVVNGSVFMQGKASSMVATALAPKP
GWEVLDACSAPGNKTVHLAALMGDEGKVIACELNEERVKRLKETIRLSGASNIKVLHGDF
LHLNPEDPAYSKVQAILLDPSCSGSGTASARLDHLLPSSAPGHTADFTETERLNKLAAFQ
EKALAHALSFPEVERIVYSTCSVNQIENEDVVNSVLPLAESYGFELETLFPKWQRRGLPV
FKGAERLLRTDPVEDKEGFFIALFVRKRSDQSEEPNLTNEDNTRKHRHASKRIVVPPTTN
LFKIWAHAMVNRPNCSCCG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtacgagagtcgcagcgacgccgccgtcgacggccggcgagaagtcagaaaca
cggcgccgtttaagcatggagaggtcggcgctgttcgccaggagagaggcggcgaaggtt
ttgaagcaaattctccaaggcgactcccggcggcggtccgtcggctctatcaagtcgctc
gtttacagtccgtcggtgaggaacaagaaggggacctttgctctggtctgcgaaacccta
aagcatctcaagataatcaaacaggtgttgaatgctgcagacgttctgaatagcaagtgg
aggaagcaagatgagttggtttacattgtcacctatgatattcttttcggcaaggtgact
tcgtcgactggtgatgcagagaggtttctcttgcttcggaaaggggctctgcaggcagct
ctagatcgccttttagtgaagaaaaaagtgaagagcgttgaagagttgatagctctcgat
cagactcctgagatttcaaaacctcggtatgttcgtgttaatactctgaaaatcgatgtc
aatacagccttgtttgaattacagaaacaatacaaggttcaaaaggatgatctgcttcct
gacttgctgattcttccacccagcagtgacttgcatgaccatcctctagttgtcaacgga
agtgtcttcatgcaaggaaaggcaagctctatggttgcaacagcccttgctccaaaacca
gggtgggaggttcttgatgcatgctcagctccaggaaataaaacagtccacctagcagct
cttatgggagatgaaggaaaagtcatagcatgtgagctgaatgaagagagggttaaacga
ctaaaagagacgatcagactctcgggtgcctctaatattaaggttctgcacggagatttc
ttacacttgaaccctgaggatcctgcatattccaaggttcaggccattctattggatcct
tcctgctctggatccgggacagcttctgcaagattagatcacttgctcccttcttctgct
cctggtcacactgccgacttcacagagacagaaagactgaacaagcttgcagcgtttcag
gaaaaagctctggctcatgcgttgtcttttccagaagtggaaagaattgtttacagcaca
tgctctgtcaaccaaattgaaaatgaggatgtcgtcaattctgttctacctcttgctgaa
tcttatggttttgaacttgaaactctgtttcccaaatggcaacgccgtggtcttccggtt
ttcaagggtgccgaacgcctgcttcgaactgatcctgttgaggacaaagaaggcttcttc
attgctttgtttgtcagaaaacgctctgatcaatcagaggaacctaatttgacaaatgaa
gataacactcgcaaacatcgacatgcaagtaagagaattgttgtaccacccactaccaat
ttgtttaaaatctgggcacatgctatggtgaataggccaaactgtagttgttgcggatga
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