Fragaria vesca (woodland strawberry): 101313871
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Entry
101313871 CDS
T02666
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101313871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101313871
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101313871
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Motif
Other DBs
NCBI-GeneID:
101313871
NCBI-ProteinID:
XP_011460103
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Position
LG3:complement(1660233..1665942)
Genome browser
AA seq
473 aa
AA seq
DB search
MQSDSGKLFIGGISWDTNEERLKEYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVA
DTVIMEKHNIDGRMVEAKKAVPRDDQNTLSRTSGSIHGSPGPGRTRKIFVGGLASTVTEG
DFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKR
AVPKELSPGPSRSPLGGYNYGLSRVNSFLTGYTQGYNPSTVGGYGLGRFSPVAGGRSGFP
PFGSGYGMGMNFEPGLSPNYGGNANFNNNASYGRGLSPYYINNSNRFSNPVGYDGGNGGS
SSFFSSVTRNLWGNGGLNTNSANSSAYMGAGSGSIGGNTFGNAGVNWRSSAISPQGGGNN
VSNNSGTLGYGAGDNSYGLGTGAYGRNSGATVGPTSSLAASNGGYEGAFADFYNGGSVYG
DPTWRSSNSERDGSGPFGYGLGSAASDVSAKSSPGFVGGYSVNKRQPNTGDVK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccgatagtgggaagttattcattggcggcatatcttgggacacaaatgaagag
cgtctgaaagagtattttagtgcttttggggaggtggtagaagcagtgatcatgaaggat
cggaccacaggaagagctcgtggatttggttttgtagtttttgctgacccagccgttgca
gacactgtcataatggaaaagcacaacattgatggaagaatggtggaggcgaaaaaggct
gttcccagggatgaccagaacactttgagtagaaccagtggcagcatccatggttcacca
ggtccaggacgcacaagaaaaatatttgttggaggtttagcatctactgttacagaaggt
gacttcaagaagtattttgaacagtttgggacaattacagatgttgtggtaatgtatgat
cacaacacccagaggccaagaggctttggatttatcacttatgattcagaggaagcagtg
gacaaggttttgcttaagacatttcatgaactgaatgggaagatggttgaggtcaagcgt
gctgttccaaaagagttatcacctggtcccagtcgcagtcctcttggtggatacaattac
ggtctcagtagggtcaatagcttcctcactggctatactcaggggtataatccaagtact
gttggaggttatggacttggtaggttcagtccagttgctggtggtcgaagtggatttcct
ccgtttggttctggttatggaatgggaatgaactttgagccaggattgagcccaaattat
ggaggaaatgcaaattttaataataatgcgagctatggacggggattgagcccttactat
atcaataattcaaataggtttagcaatcccgttggatatgatggtggtaatggaggaagc
tcatcatttttcagctcagtgactcggaatttgtgggggaatgggggtcttaatacaaat
tctgcaaattccagtgcttacatgggagcaggaagtggtagcattggaggaaatacattt
ggcaatgctggagtcaattggcgttcttcggcaatttcacctcaaggtgggggaaataat
gtctctaacaatagtgggacacttggctatggagctggtgacaacagttatggcttggga
accggagcgtatggaagaaacagtggtgcaactgtgggccctacatcttctcttgctgca
tcaaatggtggttatgagggggccttcgctgacttctacaatggtggttcagtgtatgga
gatcctacttggagatcatcaaattctgagcgagatgggtctggcccctttgggtatggg
cttggcagtgcagcttctgatgtttcagctaaaagttctcctggtttcgttggtggttat
agtgttaataagagacagccgaatacaggtgatgtcaaataa
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