Fragaria vesca (woodland strawberry): 101313898
Help
Entry
101313898 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101313898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101313898
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101313898
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101313898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
101313898
NCBI-ProteinID:
XP_004300880
LinkDB
All DBs
Position
LG5:complement(2845099..2846910)
Genome browser
AA seq
318 aa
AA seq
DB search
MPAVHELLRLLAMEDDGVECLSSCDEICQEHIYHRRLCRRRRLHRLSLASAGKSRAKNLH
ELLQCPVCTNSMYPPINQCLNGHTLCSICKSKVKNCCPTCREELGDIRCLALEKVAESLE
LPCKYGPLGCLEMFPYYKKVKHEAKCDFRPYNCPYPGSECSAIGDIAFLVDHLIVDHKVD
MHNGCSFDHLYVKSTPRETENAAKMLKVFNCYSHYFCLHFEAFQLGIAPVYIAFLRFMGN
AVEARTFSYRLEVGAHGRKLIWEGTPRSIRESHQKVRDSHDGLIIQRNMALFFSTGERKE
LKLRVTGRIWKAKSTLST
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagtgcatgagttattaaggcttttagcaatggaggatgatggtgtggaatgt
ttgtcatcctgtgatgagatctgtcaggaacacatttatcaccgccgcctctgccgccgc
cgtcgtctccaccgtctttcattggcctctgccggtaagtctcgggctaaaaacctccat
gaacttctgcaatgccctgtctgcacaaactctatgtacccaccaatcaaccagtgccta
aacgggcacactctgtgttccatttgcaaatcgaaagtgaagaactgctgcccaacttgt
agagaagaacttggagacatcagatgtctggcattagagaaagtcgccgagtcactggaa
cttccttgcaagtatggccctttgggatgcttagagatgtttccttactacaagaaagtt
aagcatgaggctaaatgtgacttcagaccatataattgcccctaccctggatctgagtgc
tcagcaattggggatattgcttttctggttgaccatctcatagttgatcacaaggttgat
atgcacaatggatgcagctttgatcatctttatgttaagtctactccccgggagacagaa
aatgcagccaagatgcttaaggtattcaactgttacagccattacttctgcctgcatttt
gaagccttccaacttggcattgcaccagtttacattgcatttctccgtttcatgggcaat
gcggtcgaagcacgaacctttagctacagacttgaagtcggagcacatggaaggaaactc
atatgggaaggaacccctcgaagcatacgtgagagccatcagaaggtaagggacagccat
gatggtctcataatccagcgaaacatggcactctttttctccactggagaaaggaaggag
ctcaagcttcgggtcaccggacggatatggaaggctaagagcactttgagcacatag
DBGET
integrated database retrieval system
