Fragaria vesca (woodland strawberry): 101313919
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Entry
101313919 CDS
T02666
Name
(RefSeq) probable serine/threonine-protein kinase vps15
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101313919
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
fve01001
]
101313919
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101313919
Enzymes [BR:
fve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101313919
Protein kinases [BR:
fve01001
]
Serine/threonine kinases: Other
VPS15 family
101313919
Membrane trafficking [BR:
fve04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
101313919
Autophagy
Autophagosome formation proteins
PI3K complex
101313919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
PK_Tyr_Ser-Thr
HEAT
EIF3I
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
APH
Beta-prop_Vps41
Tti2
Cohesin_HEAT
Motif
Other DBs
NCBI-GeneID:
101313919
NCBI-ProteinID:
XP_011468738
LinkDB
All DBs
Position
LG7:complement(147833..155324)
Genome browser
AA seq
1551 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRG
DSIDLRDYERRLFHIKETFRALDHPHVWPFQFWQETDKAAYLVRQYLFNNLHDRLSTRPF
LSLIEKKWLAFQLLLALKQCHDKGICHGDIKCENVLVTSWNWLYLADFASFKPTYIPYDD
PSDFSFFYDTGGRRLCYLAPERFYEHGGEMQVAQDAPLRPSMDIFAVGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQLLEKIPDFGIRKMILHMIQLEPELRLAADSYLQEYTTIVFP
SYFSPFLHNFHCFWNPLHCDMRIALCQSVFPEILKQMMSNRSTQDTSTGLGTPSNIHAVN
SKSSQDTKNMNMPKGSLGKKVEMDKGLKRDQYELLGDINTLLRDVKQSNHYSNTKTMPED
NTGSAFSQNLGNYGMQSPGELLQTISRAFRRNDHHFLKKITMNDLNSLMSKYDSQSDTFG
MPFLPLPEDSLRCEGMVLITSLLCSCIRNVKLPHLRRRAILLLKSSALYIDDDNRLQRVI
PYVVAMLSDQAAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDSEESVR
ICYASNIAKLALTAYGFLVHSITLSEAGVLDEVSSKNQLASSSEASGQLHKLNGDAQLAQ
LRKSIAEVIQELVMGPRQTPNIRRALLQDISNLCCFFGQRQSNDFLLPILPAFLNDRDEQ
LRAVFYGQIVYVCFFVGQRSVEEYLLPYIEQAVSDSTEAVIVNALDCLAILCRSGYLRKR
ILLEMIERAFPLLCYPSQWVRRSAVSFIAASSECLGAVDSYVFLAPVIRPLLRRQPASLA
SEKALFSCLKPPVSRQVFYQVLENARSSDMLERQRKIWYNSRPQSKQWENVDLLHKGIAE
LNSMRSWTDDQENPEGQKRAGNELQQGKLTECDDGVAKFGCMGSFTHKASSTVDIHDPLS
SEKLQYSGFMWPQGSTVNSFMCDKSSVGIPLYSFSMDRQAVGVTSASSDSPLQVSSVGVG
ASSMPWMDPVNKSFSLASTVPAPKLVSGSFNIGSGSKQFYRVVHEPDGRDNDQTAFVNSK
FQDMGLTSATKASSITVEDASSTSDLTGLPSSARASSIPDSGWRPRGVLVAHLQEHRSAV
NDIAISTDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCSAMLRGCAQV
VVGACDGMIHMFSVDYISRGLGNVVEKYSGVADIKKKDTKEGAILSLLNFSADNCANQMV
MYSTQNCGIHLWDIRTNSDSWTLKATPEEGYVSSLVTGPCENWFVSGSSRGVLTLWDMRF
LVPVNSWQYSAVCPIEKMCLFLPPPNASVSAAARPLVYVAAGCNEVSLWNAENGTCHQVL
RVASYESDTEMSEVPWALSRSSAKNSKADMRRNVNPHYRVDELNEPPPRIPGIRSLLPLP
GGDLLTGGTDLKIRRWDHYSPERSYCICGPNLKGVGNDDFYGIRSSFGVQVVQETKRRPL
TTKLTAKAVLAAAATDTAGSHRDSILSLASVKLNHRHLISSSRDGAIKVWK
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatagcgcggacgacgcaggtgtcggcgtcggagtattacctgcacgac
ctgccgtcttcgtataacctagtgctgaaagaggttctaggtcgcggacgcttcttcaag
tcgattcagtgcaagcacgacgagggtttggtcctcgtcaaggtctatttcaagcgcggc
gactccatcgatctccgcgactacgagcgccgtctcttccacatcaaggagaccttccgc
gccctcgatcaccctcacgtctggcccttccagttctggcaagagaccgataaagcggct
tatcttgtgcggcagtacttgttcaacaacctccatgatcgattgagcacccgccccttt
ctcagtctcatcgagaagaaatggctggctttccagttgcttctggcactgaaacagtgc
catgacaaaggaatatgtcacggtgatatcaagtgtgagaatgtgctggtcacttcttgg
aactggctctatcttgccgactttgcatccttcaaacccacctacatcccctacgacgac
ccttctgatttctcttttttctatgacactggtggaagaaggctttgttatcttgctccc
gagagattttatgagcatggaggtgagatgcaagttgcacaagatgcaccattaagacca
tccatggatatatttgctgtagggtgtgtgattgctgagcttttcctcgagggtcagccc
ctatttgaactctctcaacttctcgcttatcgtagagggcaatacgatcctagtcaactt
cttgaaaagataccagattttggaatccgcaaaatgatacttcatatgattcagttggaa
ccggagttacgacttgctgctgatagctacctgcaggagtatacaactattgtgtttccg
agttacttctctccgtttctgcataactttcattgtttctggaatccgcttcattgtgat
atgaggattgcactttgccagagtgtttttcctgagatactgaaacaaatgatgagcaat
aggtcaactcaggacactagcaccggacttggaactccttcaaacatccatgctgttaac
agtaaatcttctcaggacacgaagaacatgaatatgccaaagggctcactgggaaagaaa
gtagagatggataaagggttaaaacgtgatcaatatgaacttcttggtgatatcaatacc
cttctcagggatgttaaacaaagtaatcattattctaatacaaagacaatgccggaggac
aacactggttctgcattctcccaaaatcttggaaactatggcatgcaatctcctggtgaa
ttacttcagacaatctctcgtgcatttaggagaaatgatcatcactttctaaaaaagatt
acaatgaatgatttgaattcattgatgtctaagtatgacagccaatcagatacctttggc
atgccctttttaccattacctgaagatagtttgagatgtgagggcatggttctgattacc
tctctgctatgttcttgcatacgcaatgtcaaattgcctcatttaaggaggagggcgata
cttttgctgaagtcatctgcattgtatattgatgatgataaccggctgcagcgtgtaatt
ccttatgttgttgcaatgctttcagatcaagctgcaattgtgcgttgtgcagccttggag
acgttatgtgacattctccctttagttcgagattttcctcctagtgatgcaaaaattttt
cctgagtatattctgccaatgctttccatgcttcctgatgattcagaggaaagtgtaagg
atatgttatgccagtaatatagctaagctggcactaactgcttatggtttcttagttcac
tcaataaccttgagtgaggctggtgtgcttgatgaagtaagttctaagaaccaactggca
tcatctagtgaggcatctggtcagctccacaagttaaacggtgatgcacagcttgcccag
ttgagaaagtccatagctgaagtcattcaggagcttgttatgggtcctaggcaaactccc
aatatcaggagagcactccttcaggatattagcaatctatgctgcttctttggccagagg
cagagtaatgactttttgttaccgattctccctgcttttctgaatgatcgagatgagcag
ctaagagcagtattctatggccaaattgtgtatgtgtgtttctttgtaggtcaaagaagt
gtggaagaatatcttttaccttatattgagcaggctgtaagtgattctacagaggccgtt
attgtcaatgcattggactgtttggccattttgtgcagaagcggttacttgcggaagagg
atactcctggaaatgattgagcgggcatttccattactatgttatcctagtcagtgggta
agaaggtcagctgtcagttttattgcagccagcagtgagtgcttgggtgcagtagattca
tatgtattccttgctcccgttattcgcccccttcttcgtagacagccagcatctctagct
tctgagaaggctctcttttcatgtttgaagcctcctgtctcgagacaggtattttaccaa
gttctagaaaatgcaaggagttctgacatgttggaaagacagagaaaaatatggtacaat
tctcggcctcaatctaaacaatgggaaaatgtggatttacttcataaagggattgcagaa
ttgaattcgatgaggagctggacagatgaccaagaaaatcccgagggtcaaaaacgtgct
ggaaatgaattgcaacaggggaagctaactgaatgtgatgatggtgtggctaagtttgga
tgtatgggaagctttacgcacaaggcttcgagcacagttgacattcacgatcccttatcc
tctgaaaagttgcagtactcgggctttatgtggccacagggaagtactgtgaatagcttc
atgtgtgataaatcatcagtagggatacctctgtactcctttagcatggacaggcaagca
gtgggagttacttctgcttcatctgattctccattacaagtgagttctgtaggagttggt
gcgtcatctatgccatggatggatccagtaaataaatcttttagtttagctagtactgtt
ccagcacccaaactggtgtcaggatcattcaacatcggcagtggttctaaacaattttat
cgagtagtccatgaaccagatggtagggataatgaccaaacagcctttgtcaatagcaag
tttcaagatatggggttaactagtgctacaaaagcaagttctattactgtggaagatgca
tcctctacaagtgatctaacgggactgccctcttctgcaagagcttcatcaattccagat
tctggttggaggcctcgtggagttttggttgcgcacttgcaagagcatcggtctgctgtc
aatgacatagctatttcaactgatcatagcttctttgtgagtgcatctgatgattccact
gtcaaggtctgggattcgagaaagttggagaaggacatctcatttaggtcaagattgact
tatcatctggagggaagccgtgcactatgctctgcaatgcttcggggctgtgctcaagtt
gtagttggggcatgtgatggcatgatacatatgttttctgttgattacatttccagaggt
cttggtaatgtagttgagaagtactcaggggttgctgatatcaagaagaaagacacaaaa
gaaggggcaatacttagccttttgaatttctcagctgacaactgtgcaaatcaaatggtt
atgtacagcacccaaaattgtgggatccatctttgggatataagaacgaattcagattca
tggacactgaaagcaactccggaagagggctatgtgtcttccctagtaacagggccttgt
gaaaattggtttgtatcaggatcttcaaggggtgtgctcactctttgggatatgaggttc
cttgttcctgtgaactcatggcagtattctgctgtttgccccatagagaagatgtgtctt
ttccttcctcctccaaatgcttctgtatctgctgctgcaaggccccttgtttatgtagct
gcaggctgcaacgaagtttctctttggaatgcagaaaatggcacctgccatcaggtgttg
agggttgccagttacgaaagtgacactgaaatgtctgaggtgccttgggccttgtccaga
tcatcagctaaaaattctaaagcggatatgagacggaatgttaatcctcattacagagtt
gatgaactgaatgaaccacctcctcggattcctggcatccgttcattgcttcccttacct
gggggtgatttgttaaccgggggaactgacttgaagatacgtcgatgggatcattacagc
cccgaacgaagttactgtatttgtgggccaaacttgaagggtgtgggaaatgatgatttc
tatggaatacgatctagctttggtgtgcaagttgtgcaggagacgaaaagacggcctcta
acaacaaagttgacagccaaggcagttcttgcagctgctgccactgatactgctggcagc
catcgtgattcaatcctttcattggcctctgttaagttgaaccacagacacttaatatca
agcagtagagacggggcaatcaaggtctggaagtga
DBGET
integrated database retrieval system
