Fragaria vesca (woodland strawberry): 101314286
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Entry
101314286 CDS
T02666
Name
(RefSeq) disease resistance protein RPM1-like
KO
K13457
disease resistance protein RPM1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101314286
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Gene cluster
GFIT
Motif
Pfam:
NB-ARC
LRR_14
Rx_N
WH_DRP
LRR_R13L1-DRL21
AAA_22
NACHT
AAA_16
LRR_8
AAA_14
LRR_4
NPHP3_N
NTPase_1
KAP_NTPase
Lipoxygenase
ATPase_2
LRR_RPS2
AAA_25
AAA_19
Motif
Other DBs
NCBI-GeneID:
101314286
NCBI-ProteinID:
XP_004301648
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Position
LG5:20307554..20310935
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AA seq
954 aa
AA seq
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MSSESAVSFLLNKIYPFFANGVQIWRGVREELIYLKGELERMRALLKNADAIEESDEELK
VWVKQIRDVAHDAEDVIDEFTLLQTYHNHGHSLYCALDLLSCCVKNLKAHYRVAKELQTI
NIRIKEIFLVHKRLLPKLNSAANGSIFTNSGRSTWHDRREDALLLDNTDVVGIDEPKDLL
VSWLVNGDSGREVVSVTGMGGMGKTTLVKKVYDDVEVKKRFKPRAWITVSQSFEAQDLLK
DIIRKLYSEIGRQVPEGVDGMSSHKLKVRIKNLLQKRRYLIVLDDVWRINEWETVKYAFP
NGKLGSRVMITTRNSDVASTSCSESGGHVHEVRPLPEKESWSLFSRKAFQRKSCPSYLES
FCEDILKKCEGLPLAIVAISGVLATKDERRIDEWDAICRSLGAEIHGNDKLEDLKKVLSL
SFNDLPYNLKACFLCLSVFPEGHLIKSMKIIRLWIAERFVEAIEGRTLEEVAEDYLKELL
NRNLMLVGSTTSDGRVKTYRVHGLLREIIVSKSRDQNFAAIVKEHNTIWPDRVRRLSIQN
VLQTVQQSRSFPQLRSLFMFGAVSRSSMRKYLSNGFRLLKVLDIEAAPIKTFPREIMDLF
YLSYLSLRKTQVKVIPRSIGNLQNLETLDLKHTYVSELPVEILKLQKLRHLLVYHLKIES
YAHFYSKFGFEVLSSIGDLQSLQKLCFIEANQGCGMTIRDLAKLKQLRRLGIIKLRKEDG
LALCLSLESLTKLRSFSVNSAGENEIIDLQHLSSPPQFLERLYLTGRLEELPSWIPSLHS
LVKLFLKWSQLKDDPMVLLQDLPNLVHLELLQTCDNDILSFKGGGFKKLQVLGLDKFDKL
SCVKVEKGAMPCLERLTIQRCKLLKRVPSGVQNLAKLKSLQFFDMPYELISKLLPDGEGE
DYEDVAHIPEVYSAYWRDGGWDVYPIDSFKEIKNSPSSAGTVRRSHELRPLWKV
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaaagtgcagttagttttctactcaacaagatttatccttttttcgcaaat
ggagttcaaatctggagaggggttagagaagaacttatttacttaaaaggggaattggag
cgcatgagagccctactgaagaatgcagacgcaattgaagaaagtgatgaagaactcaaa
gtatgggttaagcagatacgagatgttgctcatgatgcagaagatgttatagatgaattc
acactcctccaaacatatcacaatcatgggcactcactatattgcgctttagacttgctt
tcttgctgtgttaagaacctgaaagctcattatcgggttgctaaggagttacagaccatc
aacatccgaatcaaagagatctttctagtgcataaaagacttctcccaaaactcaattct
gctgcaaatggctccatctttaccaattcaggtagaagcacatggcatgatcggcgagag
gatgctctacttttagacaataccgatgttgtgggcatagacgagcctaaagacctactg
gtcagctggctggtcaacggtgactctggacgtgaagtagtttcagtgaccggaatgggt
ggtatggggaaaactaccttggtgaagaaagtctacgatgatgtagaagtgaagaaacgt
ttcaaaccccgtgcctggatcacagtttctcagtcttttgaagcacaggatctccttaaa
gacatcattcgaaaactctattcagaaattgggaggcaagttccagaaggggtagatggc
atgagtagccataaactgaaggtgagaataaagaacttgctgcaaaaaaggaggtatctg
attgttcttgatgatgtatggcgcatcaatgaatgggagactgtcaaatatgcttttcct
aacggaaagcttggcagcagagtcatgatcaccacacgtaactctgatgtggcatccacc
tcttgctcagaatccggaggtcatgtccatgaggtgagacccttgcctgaaaaggagtct
tggagtctgttcagtaggaaggcgtttcagaggaagtcatgcccttcttatttggaatca
ttctgtgaagatattctgaaaaagtgtgagggtttgccccttgcaatcgtggcaataagt
ggtgttttggctacaaaagacgagcgcagaatagatgagtgggatgctatttgccgtagt
ctgggagctgaaatccatggcaatgataaacttgaggatttgaagaaagtcctttctctc
agttttaatgatctgccctataatctgaaggcatgctttttgtgcttgagcgtctttccg
gagggccatctgattaagagtatgaaaatcattcgcttatggatagcagaaagatttgtt
gaagctatagaaggtagaacactggaggaagtagctgaggactacctcaaggagctcttg
aacagaaatttgatgctagtaggaagcacaacaagtgatgggagggtcaaaacttatcgc
gttcatggccttttgcgagagattattgtctcaaaatcaagggatcaaaactttgcagcc
atagtgaaggagcacaacacaatctggcctgatagagttcgacgcctgtcaatacaaaat
gtattgcaaactgtacaacaaagcaggtcatttcctcaacttcgttccttgtttatgttt
ggggccgtttcaaggtcatcaatgcgcaaatatctttccaatggctttaggttgcttaag
gtgttagatattgaagctgcaccgataaagacatttccaagagagatcatggatctcttt
tatttgagttatctaagcttgaggaagactcaggtgaaagtcattcccagaagcataggg
aatctgcagaacctggagacattggatcttaaacatacttatgtctctgagttgcctgtt
gagatactaaagctccaaaaacttcgccacctcctggtttatcatcttaagattgaatct
tatgcacacttctattccaagtttggctttgaggtcctctcaagtataggagatttgcag
tccctgcaaaagctctgttttattgaggcaaatcaaggttgtggaatgacaatcagggac
ttagctaagctcaagcaacttaggaggttgggaatcataaaattgagaaaagaagatgga
ttggctttgtgcttgtcgcttgaaagtttgaccaagctgcgttcattttctgtaaattct
gcgggagagaatgagataattgatctccaacacctgtcttcccctcctcagtttcttgaa
cgactatacctgacaggtcgtttggaagagttaccaagttggataccttcactacatagc
ttggtgaagttatttttgaagtggagtcagttaaaggatgaccccatggtccttcttcaa
gatttgcccaatcttgttcatcttgaattgcttcagacttgtgataatgacatattgtca
tttaagggtggaggatttaaaaagcttcaggttttgggtcttgacaaatttgacaagctc
agttgcgtgaaggtggagaagggagcaatgccatgccttgaaaggctgacaatccaacga
tgcaagttgttgaagagggtaccatcaggagttcaaaaccttgccaaactgaaatcactt
cagttctttgacatgccatatgaattaatctcaaaactgctgccagatggagaaggtgag
gattatgaagatgttgcacatatcccggaagtttattcagcctactggagagatggtggt
tgggatgtctacccaatagacagtttcaaggagataaaaaatagtccctcatcagctggt
actgttaggagaagccatgaacttcgtcctctttggaaggtatag
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