Fragaria vesca (woodland strawberry): 101314382
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Entry
101314382 CDS
T02666
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101314382
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101314382
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101314382
NCBI-ProteinID:
XP_011464385
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Position
LG5:complement(8532060..8533634)
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AA seq
439 aa
AA seq
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MALEADRKLKLVILCLLMSIAIPVLKANIGMFDDVWEQRQKEAEQAAKAAYQHDPLKHVV
HLNKQVHKAMKGHNDTRRNLRHHVDGPCEAINPIDKCWRCDPNWHENRQKLADCALGFGH
GTTGGKGGKIYVVTDDTDEDMVNPKEGTLRYAVTRPEPLWIIFEEDMKIELKQELMMASD
KTIDGRGVNVHIQGGGQITLQYVRNIIISNIHVRDTIPKNGGMIRDSINHYGLRTESDGD
GISLFGATNVWIDHVSASNCADGLIDVIQASTAITISNSHFTDHNDVMLFGSSDSNSKDE
IMQITLAFNHFGQGLVQRMPRCRFGFFHVVNNDYTHWIMYAIGGSSHPTILSQGNRYIAP
ENEAAKEVCYRVNTDKSVWKNWNWQSDKDLFVNGATFTESGGPVHSIDTKDMIEAQAGTA
VTFLTRYAGPLKCRKGQGC
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcattggaagctgatcgcaagctgaagctggttatattatgtcttctcatgtcaata
gcaattccagtcttgaaggccaacatagggatgtttgatgatgtgtgggagcaacgacag
aaagaagctgagcaggctgcgaaggctgcctaccaacatgatcctctaaagcatgtagtc
catttaaacaagcaagtgcacaaggcgatgaagggtcataacgacacaagaaggaacttg
agacaccatgttgatggtccatgtgaggctataaacccgatcgacaaatgctggagatgc
gacccaaactggcatgagaatcggcagaagctagccgattgtgctcttggctttggacat
ggtacaaccggaggcaaaggtggaaaaatctatgtggtcacagatgatactgatgaggac
atggtgaacccaaaagaggggacattgcggtatgctgtgactcgacctgaaccgctgtgg
atcatatttgaagaagacatgaagattgaactgaaacaagagctcatgatggctagtgac
aagaccattgatggacgaggggttaatgtgcacattcagggtggtggccaaataactctg
cagtatgtgcgcaacatcattatcagtaacattcacgttcgtgacaccattcctaagaat
ggtggcatgattagggattccatcaatcactatggattacgaacagaaagcgatggtgat
ggaatatccttgtttggtgccacaaacgtttggatagaccatgtttctgcatcaaattgt
gccgatggacttattgatgtcattcaagcgtctaccgccattaccatatccaactctcac
ttcaccgatcataatgatgtgatgctgtttggttcaagtgacagcaacagcaaagatgaa
attatgcagataactttagctttcaaccatttcggacagggattggttcagaggatgcca
aggtgcagatttggttttttccatgttgtgaacaatgactacacacactggattatgtat
gccatcggcggcagcagccatcctaccatactaagccagggaaatcgctacattgctcca
gaaaatgaggcagctaaagaggtatgttatagagtcaacacagataagagcgtatggaaa
aactggaattggcaatcagataaagatctttttgtgaatggagcgacttttactgaatct
ggaggccctgttcatagtatcgacacgaaggatatgatcgaagcgcaagctgggacagcc
gtgacctttctcacacgctatgccggtcctcttaaatgtagaaaaggccagggatgttag
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