Fragaria vesca (woodland strawberry): 101314490
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Entry
101314490 CDS
T02666
Name
(RefSeq) transcription initiation factor TFIID subunit 12
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101314490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101314490
03036 Chromosome and associated proteins [BR:
fve03036
]
101314490
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101314490
Coactivators
SAGA/TFTC/STAGA complex
101314490
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101314490
STAGA complex
101314490
TFTC complex
101314490
SAGA complex
101314490
SLIK complex
101314490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
TFIID-31kDa
ChpA-C
Motif
Other DBs
NCBI-GeneID:
101314490
NCBI-ProteinID:
XP_004305348
LinkDB
All DBs
Position
LG6:12740191..12745128
Genome browser
AA seq
538 aa
AA seq
DB search
MDPQNSTTTTTTPPIPSTSEPPQPQSQPPPQPPPSSASAPSTPTPIPPSPNPNPKPSTPS
LPPPQSLPAPAQTRPPPALNRSWPPPPHYSHHLPSPSPSASSVPPAPSVSGPPPRGGIAI
GVPAHHPSPPSPQPTPYPSSYGHFGGLGRGAGVSLPEPSANSNASQVRPPMPGMQGMGML
GSLGSSSQMRPAGISPHHPQRPVQSPLRPASTASNQSPSSQNFQGHNLSRASSLGSPSSP
NTSQGLALHSQPWLSGSQGKPPIPSSPYRQQIAPTSMLQRSHLPQQQQQQQHLPLPTTPP
QQQQGPITTASPQQHMPSVQHQQPSSSHQGHDHFGQQAPPPRITQASPRQQQNTRVQVPV
NQKSFPLAAAQPNSVQSTQQNRITSAETEEPGNRILSKRTIHELVNQIDPSERLDPDVED
ILMDIADEFVESITTFSCSLAKHRKSTTLEAKDILLHLEKNWNITLPGFGGDEIKGYRKP
ITNDIHKGRLAAIKKSMVATETANTRNSAGQATGNAKGGLVKVPVNISSQNVKMREVT
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggacccacaaaactccaccaccaccactaccacacctccaatcccctccacctctgaa
ccgccccaaccccaatcgcagcctccgccgcagccgccgccgtcatccgcctcagcccct
tcaacccccaccccaatccctccgtccccaaaccctaaccctaaaccctcaaccccatca
ttaccgccccctcagtccctcccagcccccgctcagactcggcctccgcccgcattgaat
cgctcatggccgccgccccctcactactcccaccacttgccctccccttctccttccgct
tcctccgtgcctccggcgccgtcggtctccgggcctcctccgaggggcggcattgccatc
ggtgtcccggcacaccaccctagccccccttcccctcaacccactccctatccctcatct
tacggccacttcggcggcctcggccgcggcgccggagttagcctgcctgaaccctccgcc
aattccaatgcttctcaggtgaggccgccgatgccaggaatgcagggaatggggatgttg
ggctcgcttggttcgagttctcaaatgcgcccggccgggatttctccacaccatccacag
agaccagttcaatcccctcttaggccagcgtctaccgcaagtaatcagtccccttcttcc
caaaattttcaagggcataacctttcaagagcctcatcattgggatctcctagttcccca
aacacatctcaaggtttggcgcttcatagtcagccatggttatctgggtcacaagggaag
cctcctataccctcctctccatataggcagcagattgcaccgacatcgatgctgcaaaga
tcacatcttccgcagcaacagcaacagcagcaacaccttccccttcctacaactccaccg
caacagcagcaaggacccatcacaacagcttcaccacaacagcatatgccatctgtgcag
catcaacaaccttcctcctcacatcaaggacatgatcattttgggcaacaagctccaccc
ccaaggatcacacaagcttcacctcgtcagcaacaaaatacaagggtacaggtcccagta
aaccagaagtctttccctcttgcagcagcacagcctaactcagtccaatcaacacagcag
aatagaatcactagtgcagaaactgaggaacctggtaacagaattcttagtaaaagaacc
attcatgagctagtcaaccagattgatccatctgagagattggatccagatgttgaagac
attctcatggacattgcagatgaatttgtagaatccattacaacatttagttgctcacta
gccaagcatcggaaatcaactacattggaagcaaaagacatactcctacatcttgaaaaa
aattggaatataactcttcctgggtttggtggtgatgaaattaagggctacagaaaaccg
attacaaatgatattcacaaggggcgtcttgctgctataaagaagtccatggtagctact
gagacagcaaatactaggaattctgcaggacaagctactggaaatgcgaagggtggtctg
gtaaaggtgccagtcaatataagctcccaaaatgtcaaaatgcgtgaagttacttga
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