KEGG   Fragaria vesca (woodland strawberry): 101314506
Entry
101314506         CDS       T02666                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1
  KO
K10752  histone-binding protein RBBP4
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03082  ATP-dependent chromatin remodeling
fve03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101314506
   03083 Polycomb repressive complex
    101314506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fve03036]
    101314506
Chromosome and associated proteins [BR:fve03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     101314506
  Histone modification proteins
   HAT complexes
    HATB complex
     101314506
   HDAC complexes
    Sin3A-HDAC complex
     101314506
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     101314506
    PRC2.2
     101314506
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     101314506
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101314506
  Chromatin remodeling factors
   NuRD complex
    101314506
   NuRF complex
    101314506
   NuRF complex (fruit fly)
    101314506
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz Beta-prop_EIPR1 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD_LRWD1 Beta-prop_RIG_1st eIF2A MIOS_WD40 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 WD40_MABP1-WDR62_1st Phage_CRI
Other DBs
NCBI-GeneID: 101314506
NCBI-ProteinID: XP_004307288
LinkDB
Position
LG7:13862829..13868769
AA seq 423 aa
MGKDDEEMRGEIEERLVNEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLEDAENDARNYDDDRAEAGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTVSAEVFVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINANSKNKTLEATQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVSKPSQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKISTALHTFDCHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENIYHDEDDLPEEPA
KQP
NT seq 1272 nt   +upstreamnt  +downstreamnt
atgggcaaagacgacgaggagatgcggggcgagattgaggagcggctagtcaacgaggag
tacaagatatggaagaagaacactccctttctctacgatctggtcatcactcacgccctc
gagtggccgtcgctcaccgtcgagtggctgccggaccgggaggagccgccggggaaggac
tactcggtgcagaagatgatactggggacgcacacgtcggagaatgagcccaattatctt
atgctcgcacaggtccagctgccgttggaggatgctgagaacgatgcgaggaattatgat
gacgatcgcgctgaggctggaggcttcggctgcgctaatggcaaggtgcaaataatccag
caaataaaccatgatggagaggttaatcgggctcgttatatgcctcaaaatccatttatt
attgccacgaagactgtcagtgctgaagttttcgtgtttgattatagcaaacacccatct
aagcctcctttagatggtgcctgcagtcctgatttgaggctcaggggtcacagcactgaa
ggatatggtttatcatggagtaagttcaagcagggtcatttactcagtggttctgatgat
gcgcaaatatgtttgtgggatatcaatgcaaattctaagaacaaaaccctggaggctact
cagatatttaaggttcatgaaggtgttgtagaagatgtagcatggcatttgaggcatgaa
tatttatttggttctgttggtgatgatcaataccttctcatatgggatctccggactcca
tcagttagcaagccttcccagtctgtagttgctcatcaaagtgaggtcaactgtttggct
ttcaatccctttaatgaatgggtggttgcaactggttccacggacaaaactgtcaagctg
ttcgatttacgcaaaatcagtactgctctccacacctttgattgccataaggaggaggtt
ttccaagtcggttggaatcccaaaaatgagactatattagcttcttgttgtcttggcagg
agactgatggtgtgggatcttagcagaatcgatgaggagcaaacaccagaagatgcagaa
gatggaccaccagagttgctttttattcatggtggtcacaccagtaaaatatctgacttt
tcttggaatccatgtgaagattgggttatatctagtgttgctgaagataacatacttcag
atctggcagatggcagaaaatatataccatgatgaagatgatttacctgaagaaccagca
aagcagccctag

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