Fragaria vesca (woodland strawberry): 101314564
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Entry
101314564 CDS
T02666
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101314564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101314564
03012 Translation factors [BR:
fve03012
]
101314564
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
101314564
Translation factors [BR:
fve03012
]
Eukaryotic type
Release factors
101314564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
G-alpha
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
101314564
NCBI-ProteinID:
XP_011464504
LinkDB
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Position
LG5:10301300..10308551
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AA seq
517 aa
AA seq
DB search
MDIEEEIRSLQLDSAEDNGDVNPEAANLDVEKSDDKMEEGDDKMEEGDGKMEEDSVDPVA
HEPKVKEKEEQHDEDEINKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKE
AKDKSRESWYMAYIMDTNEEERLKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISG
ASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVNWSKE
RYDEIESKMVPFLKTSGYNVKKDVQFLPISGLMGTNMKTRLNKEICSWWDGPCLFEALDA
IEVPLRDPKGPFRLPIIDKFKDMGTTVMGKVESGSVREGDSLVVMPNKAHVKVLAIFIDE
DRVKYAGPGENLRVRLSGIDDEDILAGFVLSSVANPIPAVTEFYAQLQILELLENAIFTP
GYKAVLHIHAVVEECEIVDLIEEIDMKTKKPKKKKPLFVKNGAVIKCRIQVINMICMEKF
ADFPQLGRFTLRTEGKTIAVGKVIDAPSKKSKQSSTN
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggatattgaggaggaaatccggtcgctgcagctggattcagcagaagataatggggat
gtaaatccagaagctgcaaatctggatgtcgagaagtcggatgataagatggaggaaggt
gatgataagatggaggaaggtgatggtaagatggaggaagattctgttgaccccgtggca
catgagccaaaagtaaaggagaaggaagaacaacatgacgaggatgaaataaataagaag
aggcacttgaatgttgtttttattggccatgtggacgctggaaagtcaactacgggaggt
caaatccttttccttagtggtcaggttgatgatcgtacaattcaaaaatatgaaaaagaa
gcgaaagacaaaagtagggagagctggtatatggcgtatatcatggataccaatgaagaa
gagaggcttaagggtaaaactgttgaagttggacgagcacattttgaaaccgagacaact
cgatttacgattttggatgcaccaggtcacaaaagttatgtaccaaatatgattagtggt
gcatctcaggctgatataggagtactggtaatatctgctcggaaaggagaatttgaaaca
gggtatgagagaggtggacagacccgtgaacatgttcagcttgcaaaaacattgggagtg
tctaaactgcttgttgttgtcaataaaatggacgatcctactgtgaactggtcaaaagaa
aggtatgatgaaattgagtcaaagatggtaccattccttaagacatcaggctacaacgtg
aagaaagatgtgcagttcctaccaatatcaggtcttatgggtacaaacatgaaaacaaga
ttgaataaagaaatttgttcatggtgggatggcccctgcctttttgaagcccttgatgct
attgaagttcctctacgggacccgaaaggtccattcaggttgcccatcatagataaattc
aaggacatgggaactactgttatggggaaagtggaatccggttcggtgcgtgaaggcgat
tcactggttgtcatgccaaataaggctcatgtgaaagtgcttgctatattcattgatgaa
gatagggtcaaatatgctggacctggtgaaaatcttcgggttaggttatcaggtatcgat
gatgaggacatactggcaggttttgtcttgtcaagtgtggctaatccaatacctgctgtt
actgagttttatgcgcagttgcagatccttgagttgctggaaaatgcaatctttacacct
ggatacaaagctgtcctgcatattcatgctgttgttgaggaatgtgagattgttgatctg
attgaggaaattgatatgaagactaagaaacctaagaagaagaagcctctttttgtaaag
aatggtgctgtaattaaatgccggattcaggtgattaacatgatatgcatggagaagttt
gccgattttccccaacttggaaggtttactcttcgtactgaaggtaaaactattgctgtg
ggaaaagtaatcgatgctccatcgaagaaaagtaaacaatcttcgacaaactaa
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