Fragaria vesca (woodland strawberry): 101314804
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Entry
101314804 CDS
T02666
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog A-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03440
Homologous recombination
fve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101314804
03460 Fanconi anemia pathway
101314804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101314804
03036 Chromosome and associated proteins [BR:
fve03036
]
101314804
03400 DNA repair and recombination proteins [BR:
fve03400
]
101314804
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101314804
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
101314804
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
101314804
FA (Fanconi anemia) pathway
Downstream FA components
101314804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
101314804
NCBI-ProteinID:
XP_004289604
LinkDB
All DBs
Position
LG1:complement(22388360..22395699)
Genome browser
AA seq
1217 aa
AA seq
DB search
MSTWHMFSDAADNFRWRFSAPDPNTRPPDAAFYTGNENLSSSARLPSMADLLLQGCSKLA
AESQMSHGGLGRSVSVKPSSLAKAASLLGASDSGRMRGSGGEIRGDGFGDSLFQTASGKM
VNISSKGLVKAKKLLSLEDENEDCSLFSGFNIGGVKDAASVSRSSVNHMTGSVQSGLTDV
SNLSSVQAQVPSLACTPSSVKLHTPGGRSTSVSTDGCMAGSMQSRCKNEFDQRFMQSEMT
NSVSTPSSVQLPTPSSIDAHKTGLVQSRFKNESKLNHLQSKMPSSASTPSSSKLLAAGGS
SECLSTDPHKTGSVQSGVTNVTDLSVMRFQKPNIAPKPSSIKFSTAGGRSISVSTDALQR
ARNLLGDPDLGTLLDEGNSDMDLTFSKGCEHDSHTASSHQKKPKSKFLTKSFVSPLQSST
NQVQTSAVKSDSTNWGTNLISQFDVVSNENARRSNGELPCGKKPFSNKPCTLTTAENNYL
ANGNGERIDPVERSLAKPLVDISNTIGTSPLSNIRMAGVKRKLGGNSVSSFKKPRISNFS
TPLHRNVPLVPNGLSTFPSDHSSFKGRVSTRYPVLVARMPLKKYFGMPPSDQTMVDCMSD
QVRRVTAINAENYMFPDESGLNYVGAEAVMHILASSGASTKNTFREWVINHYKWIVWKLS
CYERCYPTKALGKFLTLPNVLEELKYRYEREVNHGHRSAIKKILEGDASPSSMLVLCISA
IRTKHGPNIETSSGAENSSAAKVELTDGWYSVDAILDALLSKQLASGKLFVGLKLRIWGA
GLCGWVGPISPLEVSREVMLRLHINGTYRAHWDDRLGFCNRVGPPLAFKCIKSDGGLIPW
TLVGVTRIYPVLYKERLSNGRSVVRSERLETKMMQSYSQRRSNVIEGIISEFQRGLEHSH
TCNERDSEGAKLLRILETAAEPEVLMAEMSTEQLNSFTKYRAKLEAIKQSDMEKSITKAL
EDAGLAEREVMPLMRVRVVGLTRSLCKGKDSPKEGLITIWNPSEQQKSELVEGQAYTVSD
LIPTSPAADILYLLGRGSKTKWKPLCQQTMDNFRPFFSPRKSMLLSDFGQVPLSSEFDIA
AFVLFVGDVYIAGHQKKQWVFVTDGSISESKSEGLNDSLLAICFCSPHVDDQSDPPLNYN
LAGSTVGFCNLIKRAKDQMNALWVAEATENSAYFLSFDSRHCSHLKDAAASAERWGRISS
LMINRLKERVQFIIGKG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcacatgttctccgacgccgccgacaatttccggtggcgattctccgct
ccggaccccaacaccaggccgccggacgccgccttctataccggcaacgaaaatctcagc
tcaagcgctcgcttgccttccatggccgacctgttgcttcaaggctgctcaaagctcgcg
gcggagagtcagatgagtcacggcggactcggcagatccgtctccgtcaagccgtcttcc
ttagccaaagcagcttcgcttctgggggcctccgattcaggccgaatgagaggtagtgga
ggagagattagaggtgatggtttcggtgattcgcttttccagactgcctctgggaagatg
gttaatatatcttccaaaggtcttgtcaaggccaagaaattgcttagtttggaagatgag
aatgaggactgtagtcttttttcggggttcaacattggtggggttaaggatgctgcatcg
gtttcaaggtcttcggtgaatcatatgactggttcggtgcaaagtgggttgacggatgtg
tccaatctgagttctgtgcaagctcaagtgcctagtttggcttgtacaccttcatcagtg
aagctacatacacccggaggaagatctacttctgtttctactgatggatgtatggctggt
tccatgcagagtagatgtaagaatgagtttgatcagagatttatgcaatccgagatgact
aattcagtttccacaccttcatcagtccagttacctacacccagttcaattgatgcacac
aagactggtttggtgcaaagtagatttaagaatgagtccaagctaaatcatttgcaatcc
aaaatgcctagctcagcttctactccttcatcatccaagctacttgcagcaggaggaagc
tccgaatgtctttccactgatccacataagactggttcagtgcaaagtggagttacaaat
gtgactgatctgagtgttatgcgattccagaagcctaatatagcacccaaaccttcatca
atcaaattcagtacagctggaggaagatctatatctgtatccactgatgcactacaacgt
gctaggaatctccttggtgatccagacttgggaactctcctggatgaggggaattcagac
atggatctgacattttcaaaaggttgtgaacatgatagtcacactgcctcttcccaccag
aaaaagccaaagtccaaatttttaacaaagagttttgtatctccactgcaatcatcgact
aatcaagtgcagacatcagcagtcaagtcagatagtacaaattggggcactaacctgatc
agccaattcgatgttgttagcaatgaaaatgcccgcaggtcaaatggtgagttaccttgt
ggcaaaaaacccttcagcaacaaaccttgtactctcactacagcagagaacaattatttg
gcaaatggtaatggtgaaaggattgatcctgttgaaaggtcactagccaagccattggtg
gatatttcaaataccattggcacctctcctctgagtaatatacgaatggctggtgtaaag
aggaagctaggagggaattctgtttcttcattcaagaagcctcgcatttctaacttctcc
accccattgcataggaatgttccactcgttcctaatggtttgtctacttttccctctgac
cattcaagtttcaaaggaagggtttctactcgatatcctgtcctggtggctagaatgcct
ttgaaaaagtattttggaatgccaccatcagatcaaaccatggtggactgcatgtcagat
caggtgagaagagttacagcaattaatgcagaaaactacatgtttcctgatgaatctggc
ttaaactacgtaggagcagaagctgttatgcacattttggcttcttcgggagcctcaaca
aaaaatactttcagagagtgggtcataaatcactacaagtggattgtctggaaactgtct
tgttatgagagatgctatcccactaaagctttaggaaaatttttgacgctgcccaatgtg
cttgaagaactgaagtatagatatgaaagagaagtgaatcatggtcaccgctctgcaatt
aagaaaatactggaaggagatgcgtcaccttcttcaatgttggtcttatgcatttcagct
atccgcacaaaacatggcccaaatatagagactagctcaggagctgaaaatagtagtgct
gcaaaagttgaacttactgatgggtggtattcagtggatgctattctggatgctctccta
tcaaagcagctcgctagtggaaaattgtttgtcggactgaaacttcggatttggggagca
ggactctgcggctgggttgggcctatttcacccctcgaggtgtcaagagaagttatgtta
cggctacacataaatggcacatatagagctcactgggatgatcgattgggattttgcaac
cgtgttggccctcccttagcatttaagtgcatcaagagcgatgggggtctaattccttgg
actcttgtaggagtcacacggatttaccctgttttatacaaagaaaggttaagtaatgga
agatctgttgtgagatcagagaggttggagaccaaaatgatgcaatcttatagccagagg
cgctctaatgttattgagggcattatctctgagttccaaagaggactagaacattcacat
acatgtaatgagagagacagtgaaggagcaaaacttttgaggatactagagacagctgct
gaacctgaagttttgatggcggagatgagtacagaacaattgaattcttttaccaaatat
cgagcaaagttagaggcaatcaagcagtcagacatggagaaatcaattacgaaagcacta
gaagatgctggattagctgagagggaagtgatgccattaatgagggtgagggtagttgga
ttaactagaagcttatgtaaaggaaaagacagtcctaaagaaggactaataacaatctgg
aacccgtcagagcagcagaagtctgagttggttgaggggcaagcatatactgtttctgac
cttataccaacaagtccggctgctgatattctatacttgctaggaagaggatccaaaaca
aagtggaagcccttatgtcagcagacaatggacaacttcaggccctttttcagtcctcgc
aaatcaatgttattgtcagattttggtcaagttcctctttccagtgaatttgatattgct
gcattcgtgctgtttgtgggggatgtttatatagcgggtcaccagaagaaacagtgggtg
tttgtgacagatggttccatttctgaatcaaaatcagaaggactaaacgattctttactt
gccatctgcttctgttcaccgcatgttgatgatcagtcagatcctcctttaaactacaac
ctcgcaggttcaacggttggtttttgtaatctcatcaagagagcaaaggaccaaatgaat
gctctttgggtagctgaagctacagaaaactcggcatactttttgagttttgactctcga
cattgttcacatctcaaagatgctgctgcctctgctgaaagatggggcaggatctctagc
ttgatgatcaatagactcaaggagagggttcaatttattattggtaaagggtag
DBGET
integrated database retrieval system
