Fragaria vesca (woodland strawberry): 101315005
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Entry
101315005 CDS
T02666
Name
(RefSeq) WD-40 repeat-containing protein MSI3-like
KO
K10752
histone-binding protein RBBP4
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03082
ATP-dependent chromatin remodeling
fve03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101315005
03083 Polycomb repressive complex
101315005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fve03036
]
101315005
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
101315005
Histone modification proteins
HAT complexes
HATB complex
101315005
HDAC complexes
Sin3A-HDAC complex
101315005
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
101315005
PRC2.2
101315005
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
101315005
Heterochromatin formation proteins
Other heterochromatin formation proteins
101315005
Chromatin remodeling factors
NuRD complex
101315005
NuRF complex
101315005
NuRF complex (fruit fly)
101315005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD_LRWD1
Beta-prop_SPT8
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
eIF2A
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
101315005
NCBI-ProteinID:
XP_004289874
LinkDB
All DBs
Position
LG2:complement(5171385..5174612)
Genome browser
AA seq
405 aa
AA seq
DB search
MADDHEQEDTAVVEEEYAVWKKNTPFLYDLIISHPLEWPSLTVHWVPSAPQPYSDPSLAV
HKLILGTHTSDDYPNYLMVADALLPASQPNVDAVSDEPTLPKVEISQKIRVDGEVNRARC
MLQKPNMVGAKTSGSEVYVFDCTKQGLKSQDGECDPDLRLRGHDKEGYGLSWSPFKEGYL
LSGSNDCKICLWDVSALAQDRVLHPMHVYESHESVVNDVSWHSRDENLFGSVGDDCQLMI
WDFRTNRAQQTVKVHEKEVNYLSFHPCNEWVLTTASSDTTVGLFDMRKLNVPLHALSGHT
EEVFQVEWDPNHDAVLASYAGDRRLIVWDLNRIGDEQLEGDSDDGPPELLFQHGGHKAKI
SDFSWNKEVPWTISSVAEDNTLQVWQMADGIYGDDDVQEGEASDV
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatcacgagcaggaagacaccgccgtcgtggaggaagagtacgccgtctgg
aagaagaacactcctttcctctacgacctcatcatctctcaccctctcgaatggccctct
ctcaccgtccactgggtcccctccgcccctcagccttactccgatccgtctctcgccgtc
cacaagctcatcctcgggacccacacctccgatgactaccctaactacctcatggtcgcc
gacgccctcctccccgcttctcagcccaacgtcgacgccgtctccgacgagcccactctc
cctaaggttgagatttcgcagaagattcgtgtcgatggggaggtgaatagggcgagatgc
atgctgcagaagccgaatatggttggggcgaagactagtggtagcgaggtgtatgtgttt
gattgtaccaagcaggggctgaagtctcaggatggtgagtgtgatccggatttgaggttg
aggggtcatgataaagaagggtatggcttgtcgtggagcccgtttaaggagggttacctt
ttgagtggttcgaatgattgtaagatttgcttgtgggatgtgtctgctttggctcaagat
agggtgcttcatccaatgcatgtttatgagagtcatgaaagtgtggttaatgatgtatca
tggcattcgagggatgagaatctgtttgggtctgttggggatgattgccaattgatgata
tgggactttagaacaaatcgagcccaacaaactgtcaaagttcatgagaaagaggtaaac
tatctatctttccatccgtgtaatgagtgggtcttgactacagcatcttcagacactact
gtgggtctgtttgatatgcggaagctcaatgtaccattgcatgctctgagtggccacaca
gaggaggtattccaggttgaatgggaccctaatcatgatgctgtgttggcatcatatgcc
ggtgacagaaggttgatagtttgggaccttaacaggattggggatgagcagctggaggga
gatagtgatgatgggccaccagaacttctgtttcaacatggcggtcataaagcaaagata
tcagatttctcatggaacaaagaagttccatggaccatttcaagtgtagctgaagataat
actctccaggtttggcaaatggccgatggcatttacggcgatgatgatgtgcaagaaggg
gaagcttctgatgtctga
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integrated database retrieval system
