Fragaria vesca (woodland strawberry): 101315081
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Entry
101315081 CDS
T02666
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101315081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101315081
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101315081
Membrane trafficking [BR:
fve04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
101315081
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101315081
Exosomal proteins of colorectal cancer cells
101315081
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Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
bPH_3
GRAM
Motif
Other DBs
NCBI-GeneID:
101315081
NCBI-ProteinID:
XP_004306435
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Position
LG7:180422..186517
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AA seq
443 aa
AA seq
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MAGNCLEAVELTSSGRPVLLPSEIECSLLSAVDLECEDLPNFPNFKSGILTLTTHRILWV
SNSSSQGASSAIPLASISHIFTSKKSLKSIFASPRIRFQLSVSPDGRVAKSGSGSRSVVV
TVVVRGKGADLDLFLTKFWDNWRGRAWETGNADVTSGSDSVSGSTSGLYTKEGTVRMVGV
SGILRKEQEMWETTDKSLQDAFQDLNALMSKAKEMVMLAEKMRQKLLSSSTSQSSAAEDG
ELGSKQDMQDWLLSVGIVSPVTKESAGALYHQQLSRQLADFVRLPLERAGGMMNLIDIYC
LFNRARGTELISPEDLLQACFLWEKFDVPVMLRKFDSGVMVIQNKTHSDEEIFARIKSLA
TKPDALRTGISASDAAITLGIAPGMAKEHLLTAESRGILCRDISPDGFRFYINLFPEIDP
NNVYLVKDYGVYDTWSRVASASG
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaattgtctggaagctgtggagctaacaagcagtggacgccctgtcctactc
ccatcagagattgagtgttcgctcctctctgctgtagacctcgaatgcgaagacctcccc
aactttcctaacttcaaatcgggtatcctcaccctcaccacccaccgcattttatgggtc
tccaactcctcttcacaaggagcctcttctgccatcccacttgcctccattagccacatc
ttcacatctaaaaagtccctcaagtccatctttgcctcgcctcggatccggttccagctt
tcggtgtcacccgacggccgggtagcaaagtccggttcaggatccaggtccgtcgtcgtt
acagtggttgtgagggggaagggtgctgatttagacttgtttttgaccaagttttgggac
aactggcggggaagagcgtgggagactgggaatgcagatgtcacttcaggttctgattcg
gtttctgggtcgacttctgggctatacaccaaggaaggaacggtgaggatggtcggggtg
tctggaatacttaggaaggaacaagagatgtgggagacaactgataagagcttgcaggat
gctttccaggacttgaatgctctcatgagtaaagctaaagagatggtgatgctagcagaa
aaaatgaggcagaaacttttatccagctcgacttctcagagcagtgcagcagaggacggg
gaactgggttccaaacaagatatgcaagactggttgttgagtgttggtattgtatcgcct
gtcaccaaagagtctgcaggtgctctttaccaccaacaattatcccgtcagttggcagat
tttgtcaggcttccacttgagagagctggaggaatgatgaatcttatagatatttactgt
ctcttcaatcgtgctcgaggaacagaattgatctccccagaggatttgctgcaagcatgt
tttctttgggagaagtttgatgtcccagtaatgcttcggaagtttgatagtggtgtgatg
gtgatccagaataagacccacagtgatgaagagatttttgctagaattaagagccttgca
acaaagcccgatgctcttcgtactgggataagtgcgagtgatgctgcaatcacactaggt
attgcgccaggcatggcgaaggagcatcttctaactgctgaaagcagaggtattctctgc
agggatattagcccggatggctttcgcttttatatcaacctgtttccagaaatagatcca
aacaatgtttacttagtgaaagattatggagtctatgacacatggtcaagggtggcctct
gcttctggatga
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