Fragaria vesca (woodland strawberry): 101315111
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Entry
101315111 CDS
T02666
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog
KO
K14569
ribosome biogenesis protein BMS1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101315111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101315111
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
90S particles
GTPase
101315111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
AAA
MMR_HSR1
AAA_16
AAA_22
Motif
Other DBs
NCBI-GeneID:
101315111
NCBI-ProteinID:
XP_004309829
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MIDGRSSERSHKAHRSRQSGAKANKKNKKPQKEHNPKAFAFSSTVKAKRLQSRAVEKEQR
RLHLPTIDRSYGLDPPPFVVLVHGPPKVGKSLLIKCLVKHYTKHDLPSASVQGPITIVSG
KQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVL
THLDNFKDAKKLRKTKQHLKHRFWTEIYDGAKLFYLSGLIHEKYVKREIHNLARFISVMK
FHPLSWRTAHPYVLVDRFEDITPPEKVRLNKKCDRNITLYGYLRGCNMKKGTKIHIAGVG
DYSVAGMTGLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLMYDKDAVYINLNDHSVQF
SKQDEKGKAMNKGEHDDAGVSMVKSLQNPKYSLDEKLEQSIINFYVQKPKSEPQNDNNDK
SRERVRMIEPLEEHQFEEAMKAGGSGQESDVEDIDGSESISFQNDGAHNVAITKNDSSES
DRENGDVSDRDDVNLKGHLKEHVEFHEGRSRRKVVFENDLNPTDMEDSEESEDDDDGGDS
DADNHTSSGSESSEENREIHETDDDVGNIAKWKESLAERTFSRQTTNLMQLVYGKSLSVS
TKANEEQDSSADEESDGEDFFKPKGDEIKKHTVEVGKCNVEDSSKFTNPSIKDWNDKKLI
EVVRNRFVTGDWSKAAKRNQDPATFENEEEDAVFGDFEDLETGEKHDGYNANDTSKVANK
KKAGLDEEERRLKKLALRAKFDAQYDDPDTSEGEPDDTQVSQFGRDRAKESSYVDKLKEE
IELRKQMNIAELNDLDEGTRLEVEGFQTGTYLRLEVHDVPYEMYEYFHPCHPILVGGIGL
GEESTGYMQVRLKRHRWHKKVLKTSDPIIVSLGWRRYQTIPVYAIEDCNGRHRMLKYTPE
HMHCLAMFWGPLAPPNTGLVAFQNLSNNQATFRITATGVVLEFNHASRIVKKLKLVGYPC
KIFKNTALIKDMFTSDLEIARFEGASVRTVSGIRGQVKKAAKEEIGNQPKKMGGQPKEGI
VRCTFEDKIKMSDIVFLRAWTQVDVPCFYNPLTTSLQPRDHTWQGMKTVAELRRERNIPI
PVNKDSLYKPIERKQRKFNPLVIPKAIQKNLPFKSKPKDTPSRKKKLLEDRRAVVREPYE
LKISALVQNLMLIRSDKLKKRKIKDEKKRKEIEVQKAKDEQVSRKRQREERRERYRVQDK
AQKKMRRRAED
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgatagatggcaggagtagtgagcggtcgcacaaggctcacaggtcccggcagtcgggt
gccaaggccaacaagaagaataagaagccccagaaagagcacaaccccaaggcattcgct
ttcagctccactgtgaaagccaagcgtctccagtctcgcgccgtcgagaaagagcagcgc
agacttcatcttcccaccattgatcgctcttacggcctcgacccgcctccctttgttgtt
cttgtccatggacctcccaaggttggcaagtctctgctgattaagtgcctcgtaaagcat
tacaccaaacatgatttacccagtgccagtgtccaaggccccatcaccattgtatcaggg
aagcagcgccgccttcagtttgtggagtgccccaatgatatcaatggtatgattgatgcc
gctaagttcgctgatttagcattgcttcttatcgatggaagctatggtttcgaaatggaa
acttttgagttccttaatatattgcaagttcatggcttcccaaaggtcatgggagttctc
actcaccttgataacttcaaagatgcaaagaaactcaggaaaacaaagcagcatctcaag
catcgcttctggactgaaatatatgacggtgctaagttgttttatttatcaggtcttatt
catgaaaagtacgtcaaacgtgaaattcacaatctcgctcgtttcatatctgttatgaag
tttcatcctttgtcttggagaactgctcatccttatgttctagtagatcgttttgaagat
atcactccccctgagaaagtgcgcttgaataagaaatgtgatagaaatatcacactttat
ggttatctgcgggggtgtaacatgaaaaaaggaacaaagattcatattgcaggtgttggt
gattacagtgttgccggtatgacaggcttagctgatccgtgtcctttaccctcagcggcc
aaaaagaaggggctgcgtgataaagaaaaactgttttatgcgcctatgtctgggcttggg
gatctcatgtatgacaaagatgcagtgtatataaatttgaatgatcactctgttcagttt
tcaaaacaggatgaaaagggtaaagcaatgaacaaaggagagcatgatgatgcgggtgtg
agcatggttaaaagtcttcaaaacccaaaatattcgcttgatgaaaagttggagcagagc
atcattaacttttatgtccagaaaccgaaatcggaacctcaaaatgataacaatgacaaa
tccagagaaagagttcgaatgatagagcctttagaggaacatcagtttgaggaagcgatg
aaagctggtgggtctggtcaggaaagtgatgttgaggatattgatggctcagaatcaata
tcttttcagaatgatggtgctcataatgttgcaataactaaaaatgattctagtgaatct
gatagagaaaatggtgatgtatcagatcgagatgatgttaatcttaaaggtcacttgaag
gaacatgttgagtttcatgaaggaaggtcaaggagaaaagtagtctttgaaaatgatctt
aatcctactgatatggaggattcagaagagtcggaagatgatgacgatggtggtgatagt
gatgcagataatcatacctcttctgggtcagagtcttcagaggaaaatagagaaatccat
gagacagatgatgacgtgggaaacatagcaaagtggaaagagtctttggcagaacggaca
ttctcaagacaaaccactaaccttatgcaacttgtatatgggaaatctttgtcggtttca
actaaagccaatgaagaacaagacagtagtgcagatgaggaaagtgacggagaagacttt
tttaagccaaaaggggacgagatcaagaaacatacagtagaagtaggaaagtgcaatgtt
gaggactcttccaaatttacaaatccttcaatcaaagattggaatgataaaaagcttata
gaagttgtgcgcaatcgttttgtcactggtgattggtcaaaggctgctaagagaaatcaa
gacccggctacatttgaaaatgaagaggaagatgctgtatttggtgactttgaagatctg
gaaacgggtgagaagcatgatggatacaatgctaatgatacaagcaaagttgcaaacaag
aagaaagctggcttagatgaggaagagcggaggcttaaaaagcttgctcttcgtgccaag
tttgatgctcaatatgacgatcctgatacaagtgaaggggaacctgatgatacacaagta
agccagtttggacgagatcgagcaaaagaaagcagctatgttgacaagttgaaggaggag
attgaacttcggaagcaaatgaatatagctgaactcaatgaccttgatgagggcacccga
ttagaggtagagggtttccagacagggacttaccttcggttggaagttcatgatgttccg
tatgagatgtatgaatattttcatccctgtcatcctattttggttggaggaattggtctc
ggggaagaaagcactggatacatgcaggtcaggttaaagcggcacagatggcacaagaaa
gtgctaaagactagtgaccccatcattgtatctcttgggtggagacgttaccaaacaatt
cctgtttatgccattgaagattgcaatggaaggcatcgcatgcttaagtacactccagaa
cacatgcattgcctggcaatgttttggggtcctcttgcccctcccaatactggtctggtt
gctttccaaaatttatcaaacaatcaggcgacgtttaggatcaccgccacaggagttgtg
cttgagttcaaccatgcatcccgaatagtgaagaaactcaaactagttggttacccttgc
aagatatttaagaatacagcacttataaaagatatgtttacctcagatcttgaaatagct
cgatttgaaggtgcttctgttcgaacagtcagtggcatccgagggcaggtgaaaaaggct
gcaaaagaagaaatcggtaaccaaccgaaaaagatgggtggacaacctaaggaaggaatt
gttaggtgtacttttgaggacaaaattaagatgagtgatattgtgtttctgcgcgcgtgg
actcaggttgatgttccttgcttctataacccattaaccacatctctgcaaccccgtgat
cacacctggcaagggatgaaaactgtagctgagttgaggagagaacgcaatattcctatt
cctgttaacaaagattcactctacaagccaattgaaaggaagcagaggaagttcaaccca
ctggtgattcccaaagcgatacaaaaaaatcttccatttaaatcaaagcctaaggacaca
ccgagtagaaagaaaaaacttcttgaagatagaagagctgttgtgagggagccttatgaa
ttgaaaatatctgctctggttcaaaatcttatgttaatcagatctgacaagttaaagaag
cgcaagataaaggatgagaaaaaaagaaaagaaattgaagtacagaaagccaaagatgag
caggtgtcaagaaagcgccagagagaagaacgacgagagagataccgggtgcaagacaaa
gctcagaagaaaatgaggagacgtgccgaggactga
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