Fragaria vesca (woodland strawberry): 101315194
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Entry
101315194 CDS
T02666
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A-like
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101315194
Membrane trafficking [BR:
fve04131
]
Protein recycling
Others
EARP complex
101315194
Endosome - Golgi transport
Tethering complex
GARP complex
101315194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
101315194
NCBI-ProteinID:
XP_004290275
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All DBs
Position
LG2:complement(10585841..10597272)
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AA seq
708 aa
AA seq
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MALLATNNTQGHSYDDSNDAHKSVFDLGAFVGDLTVEEDASSDDISLEGLEQELEECKRD
DDVADILSKGTKLRDYTKGVENNKRKVELDSIQDYIKESDKLVSLHDEIRDCDSILSQME
TLLSGFQAEIGSISSDIKILQEKSMDMGLKLKNRKVAESNLAKFVEDIIIPPRMVDIIGD
GEVNDEYMRTLESLSKKLKFVEADLMVKSAKALKDVQPELEKLRQKAVSKVFDFIVQKLY
ALRKPKTNIQILQQNVLLKYKYVISFLKEHGKEVYIEVRGAYIDTMNKVLSAHFRAYIQA
LEKLQLDIATSSDLIGVDTRNTSLFSRAREPLKNRSAVFALGERIKILKEIEEPALIPHI
AEASSIKYPYEVLFRSLHKLLMDTATSEYHFCDDFFCEESIFYEIFAGPFAVIDEHFNSI
LPNCYDAIGVMLMIRIIHQHQLIMSRRRIPCLDSYLDKINIALWPRFKMVFDLHLNSLRN
ANVKTLWEDDVHPHYVMRRYAEFTASLIHLNVEYGDGQLELNLERLRMAVDDLLIKLAKA
FPRPKLQTVFLINNYDMTIAVLKEAGPEGGKIQIHFEELLKSNTALYVEELLLEHFSDLI
KFVKTRASEDPGANAENPITGAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEIL
RAALTQLLLYYTRLSDCIKNIVGGSTLNKDLVSISSIMYEIKKYSRTF
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggctcttcttgcaaccaacaacacacagggtcactcttatgatgacagtaatgacgcc
cacaaatctgtatttgatttgggtgcttttgttggggacttgactgttgaggaggatgct
agcagtgatgacatatcattggaaggacttgaacaagaattagaagaatgtaaacgtgat
gacgatgttgcggatattttgtctaagggtacgaaactacgggattatacaaagggggtt
gagaacaacaaacgaaaagttgaactggactcaatccaggattatattaaagaaagtgat
aaactagtatctcttcatgatgaaattcgtgattgtgacagcatcttgtcacagatggaa
actcttctcagtggatttcaggcagagataggttcaataagttccgacatcaaaattctc
caggaaaagtctatggatatgggtttaaagttgaagaatcgcaaggtggctgagtcaaat
ttggcaaaatttgttgaagacattataatccctccaaggatggtagatataattggtgat
ggcgaggtgaacgatgaatatatgagaactctagagagtcttagcaagaagctgaagttt
gttgaagcggatcttatggttaaatctgcaaaagctttaaaagatgttcagcctgagctc
gaaaaacttagacagaaagcagtctccaaggtgtttgacttcattgtgcagaagctttat
gcattgagaaaacctaaaactaacatccagattcttcaacagaatgttctcttaaagtac
aagtatgttatttcattcctcaaggaacatggaaaggaggtatacattgaagttcgtgga
gcatacatcgacacaatgaacaaggtgctaagtgcacatttccgtgcttatattcaggca
ctagagaaactacagttggatattgccacatctagtgacttaattggcgtggatacgaga
aatacaagtctattttcaagagcaagggaaccactgaagaaccggtcggctgtttttgct
cttggagagaggattaaaattttaaaggaaattgaagaacctgcattaattccacatata
gctgaagccagctccatcaagtatccgtatgaggtgctcttcaggagcttgcacaagctg
cttatggacactgctacttctgagtaccatttctgtgatgatttcttttgcgaagaatcc
atattctatgaaatttttgcaggtccatttgctgtaattgatgaacacttcaattcaata
ctcccaaattgttatgatgctattggtgtaatgcttatgatccgcattatacaccagcac
cagctcattatgtctcggcggcgtatcccatgcttggattcatacttagacaagatcaac
attgccctttggcctcgttttaagatggtgtttgacctgcatctcaacagcctgcgcaat
gcgaatgtgaagacattgtgggaagatgatgttcatcctcactatgtcatgaggcgatat
gctgaattcacagcttcacttatccacctcaatgttgaatatggagatgggcagcttgaa
ttaaatttggaaagactgagaatggctgttgatgacttgcttatcaagcttgccaaagca
tttccaagaccaaaactgcaaactgtgtttctgataaacaactacgatatgactattgca
gtattgaaggaagctggcccggaaggtggtaaaattcaaatccactttgaggaactgctt
aaaagcaacacagcattatatgtggaagaactattactagagcattttagtgatttaatc
aagtttgtcaaaacccgggcttcggaggacccaggtgcaaatgctgagaatcctataact
ggtgcagaggttgagccgcttgtgaaggactttgcaagtagatggaaagctgcaattgag
ctgatgcacaaggatgtcataacttcttttagcaactttttgtgtggcatggaaatcttg
agagctgcattgactcaactactgctctattatactaggctctcagattgcataaagaat
attgttggtgggtctactcttaacaaggatttagtgtccatatcgtcaatcatgtacgaa
attaagaaatactcgaggactttctaa
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