Fragaria vesca (woodland strawberry): 101315223
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Entry
101315223 CDS
T02666
Name
(RefSeq) phytoene synthase 2, chloroplastic-like
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00906
Carotenoid biosynthesis
fve01100
Metabolic pathways
fve01110
Biosynthesis of secondary metabolites
Module
fve_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
101315223
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fve01006
]
101315223
Enzymes [BR:
fve01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
101315223
Prenyltransferases [BR:
fve01006
]
Terpene biosynthesis
Squalene/phytoene synthase
101315223
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HTH_25
DUF3502
Motif
Other DBs
NCBI-GeneID:
101315223
NCBI-ProteinID:
XP_004296190
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Position
LG3:complement(23887340..23889269)
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AA seq
380 aa
AA seq
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MSSTFSLAPKPYIRESNGNLLPPKSMLTTIRAEVITAPKQRNTRSFPELSIQGIPVADLH
VQEIVQRQSKSIAKVGTSRKSQFDPSFLEEAYQRCRNICAEYAKTFYLGTLLMTEERQKA
IWAIYVWCRRTDELVDGPNSGHMNSEVLDSWEERLEDIFEGRPYDMLDAALTHTVLSFPL
DIKPFRDMIEGMRMDTRKCRYQNFQELYLYCYYVAGTVGLMSVPVMGIAPDSLNSTQSTY
DAALYLGIGNQLTNILRDVGEDAARGRVYLPQDELAQFGLCDNDVFARKVTDQWRKFMKE
QISRARFYFNLAEEGASQLDKDSRWPVWSSLLIYRNILDAIEENDYDNLTKRAYVGRAKK
LLMLPMAYTKSLHTPSLISQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaacattttcacttgcaccaaagccttacattagagagagcaatggaaatctc
ctgcccccaaaatctatgctcacaacaataagagctgaagtgattacagctcccaagcaa
agaaacacacgtagttttcctgaactatcaatacaaggcattcctgttgctgatttgcat
gtacaagaaattgttcagaggcaatccaagagcatagccaaggtaggtactagccgaaag
tcacagtttgatccaagctttcttgaagaagcatatcaaaggtgcaggaacatttgtgca
gaatacgccaagaccttctatttaggtactttgctaatgacagaggagcgtcaaaaggca
atatgggcaatctatgtttggtgtagaagaacagatgaactggttgatggccccaattct
gggcacatgaactcggaagttcttgatagctgggaagagagactagaagacattttcgaa
ggacggccttatgacatgcttgatgctgcattgactcatactgttctcagcttcccctta
gacataaagccttttagagacatgatcgagggtatgcgaatggacacaagaaaatgccga
tatcagaattttcaagagctttatctctactgctactatgtagctggaactgttggccta
atgagcgttcctgtaatgggaattgcacctgattctctgaattctactcaaagtacatat
gatgctgcactctacttgggtatagggaatcaactcacaaacatacttagagatgttgga
gaggatgctgcaagaggtagagtttatcttcctcaagatgagcttgcacagtttgggtta
tgcgacaacgatgtttttgcaagaaaggtcactgatcaatggagaaagttcatgaaagaa
cagatttctagagccagattctatttcaacctggcagaagaaggtgcttctcaacttgac
aaagatagccgttggccggtatggtcatccttgctgatataccgaaacatcttggacgca
attgaggaaaatgactacgataacttgacaaagagagcatatgtagggagagctaagaaa
cttctcatgttgcctatggcttacacaaaatctcttcatacacctagtttgatctctcag
tag
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