Fragaria vesca (woodland strawberry): 101315238
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Entry
101315238 CDS
T02666
Name
(RefSeq) nuclear ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101315238
Enzymes [BR:
fve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
101315238
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
101315238
Prokaryotic type
101315238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
101315238
NCBI-ProteinID:
XP_004299394
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Position
LG5:complement(8513477..8516171)
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AA seq
299 aa
AA seq
DB search
MAGSRSIGSEPIQDSPDPNSKKARGLTIEGYPVEGLSIGGQETCVIFPSLKLSFDIGRCP
QRAIAQDFLFISHAHMDHIGGLPMYVATRGLYRMKPPTIIVPKCIKEVVEELFEVHRKMD
QSELKHNLIGLDAGEEFHIRKDLKVKAFRTYHRIPSQGYVVYSVKHKLKQEYVGLCGTEI
KKMKESGVEITNILIEPQVAFTGDTTADFIVDNSNIDVLRAKILVMESTFLDESITVEHA
RDYGHVHLSEIINHAERFENKAILLIHFSARYTVNEIQQAVAALPPPLAGRVFALTEGF
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggccggaagcagaagcataggctcagagccaatccaagattccccagacccaaattcc
aagaaagccaggggtttaaccattgaagggtacccagttgagggtttatcaattggaggc
caagaaacctgtgtcatctttccgtctctcaaattgtcatttgatattggacgatgccca
caacgcgcaattgcccaagacttcctcttcatctcacatgcccacatggatcacattgga
ggactgccaatgtatgttgcaactcgtgggttataccgcatgaagcccccaacgatcatt
gtaccaaagtgtattaaagaagtggttgaagaactctttgaggtgcacagaaaaatggac
caatcggagctgaagcataatttgattggcttggatgctggagaagaattccatataaga
aaggatctcaaagtaaaagcttttaggacttatcatagaataccaagtcagggttatgta
gtatactcggtaaaacataaacttaagcaggagtatgttggcctatgtgggactgaaatt
aagaaaatgaaagaatcaggtgtggagattacaaacattttgatagaacctcaagttgct
ttcacaggagataccacggctgatttcatagttgacaatagcaatattgatgtgctgagg
gcaaagatacttgtcatggagagcaccttcctagatgagtcaattacagtggagcatgca
agggattatggacatgttcatctgtctgagataattaatcacgcagaaagatttgaaaac
aaagcaattcttcttattcacttttcagctcgatacactgtaaacgaaattcaacaagct
gtagcggcgttgcctcctcccttagcagggcgagtttttgcacttacagaaggtttttga
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