Fragaria vesca (woodland strawberry): 101315411
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Entry
101315411 CDS
T02666
Name
(RefSeq) elongation factor 1-alpha-like
KO
K14416
elongation factor 1 alpha-like protein
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101315411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101315411
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101315411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Zn_ribbon_RanBP
MMR_HSR1
GTP_EFTU_D4
DUF4473
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
101315411
NCBI-ProteinID:
XP_004292888
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Position
LG2:complement(22468642..22474235)
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AA seq
679 aa
AA seq
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MPRKGNFGLDYNDEEYDVYEDYDYDHDDDFGIETNGKEPELKQETVRRDIWRCSICTYDN
EESLTVCDICGVLRKPLGRVGSNIDKKTAPFKFDVPSPDDVVSNGLRSSKVGSKASASDL
QSSGVSSKAAKKISAVSAQSSAEWSDSSSTAARKDQQPRLDKAIQSGNWATIQSNGNLAS
SSSFQPTSSHMEEGISSLAIGGKPESLTTSSKNMSSDARSGPSKITNSRGSHSRADYKPE
KWMLPDEAVDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRVSKKDMHKYEKESKSQGKGS
FVYAWALDESAEERERGITMNVAVAYFDSRKYHVVVLDSPGHKDFVPNMISGATQADAAV
LLVDASYGAFEAGIKGQTMEHAQLIRSFGVDQIIVAVNKMDVVEYSKDRFDEIKLTLGKF
LRSRGFKDSSVYWVPLSVMENQNLVSAPSEARLLSWYRGPSLLDSIDSLQPPTRDFQRPL
LMPICDVIRSTSLGHVSACGKLEAGALRSGSKVLVMPSGEIGTVRSLERDSQACSIARAG
DNVGVTLQGIDGGHLMAGGVLCHPNFPVAFAKHLELKVLLLDVATPMLMGSEVEFHIHHT
KEAARVVKILSLIDAKGKVTKKSPRCLLAKQRAVIEVLLQGPVCVEEHTNSKALGSVSLR
ASGNTVALGVVSRIIKEQE
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtaaaggaaatttcggacttgattacaatgatgaagagtacgatgtctatgaa
gattatgattatgaccacgacgatgattttggaatagaaactaatggcaaagaacctgag
ttaaagcaggaaactgtaaggcgtgatatttggcgttgttccatttgtacatatgataat
gaggagagtttgactgtgtgtgacatttgtggggttcttcgcaaacctttgggtagagtt
ggaagcaatatcgataagaaaacagctcctttcaagtttgatgttccatctccagatgat
gtggtttctaatggattgcgatcctccaaagtgggttcaaaagccagtgctagtgactta
caatcttcaggagtttcctcgaaggctgctaagaagattagtgcggttagtgcacaatca
agtgctgaatggtcagatagctcatctaccgcggcacgaaaagaccaacaacctagatta
gataaggcaattcaatcagggaattgggcaactatacaatcaaatggtaatttggcgagc
agttcatcctttcagccaacaagctctcatatggaagagggcattagttctttagcgatt
ggaggcaagccagagtctctgactactagctctaagaacatgtcttcagatgctagatct
gggccttctaaaattactaactctaggggatcacattcaagagcagactacaaacctgaa
aaatggatgcttcctgatgaagctgttgatacattgactcaactgaatcttgcaattgtt
ggacatgttgattctggaaaatcgacactctcaggtagactgcttcaccttttgggacga
gtatcaaaaaaagacatgcacaaatatgagaaagagtcaaagtcacagggaaagggctca
tttgtgtatgcttgggcattggatgagagtgcagaagaaagggaaagaggaataactatg
aatgtggccgttgcatattttgattccagaaagtatcatgttgttgtgctcgattcccct
ggccataaagactttgttccaaacatgatatctggggcaacacaagctgatgctgcagta
cttcttgtagatgcttcatatggtgcatttgaagctggtataaagggacagacaatggag
catgcacaacttatcagaagctttggtgttgatcaaattatagttgcggttaacaagatg
gatgttgttgaatactccaaggatcgatttgatgaaatcaaactgactcttggaaaattt
ctccgttcccgtggtttcaaagattcttcagtgtattgggttccattgagtgtcatggaa
aatcaaaatttggtatcagctccttctgaggctcgtttgttgtcttggtatcgtggacct
tccctgttggattcaattgattcccttcaacctcccacaagagattttcaaaggccgctg
ctcatgccaatatgtgatgttatcagatctacttctctaggacatgtgtctgcttgtggt
aaattggaagcaggtgctcttcgaagtggatcaaaggttctggttatgccttcgggggaa
atagggactgtccgctctttggaacgagactctcaggcatgttccattgcaagagctggt
gacaatgtgggtgttactctgcaaggcattgatggtggtcatttgatggcagggggtgtg
ctttgtcaccctaattttccggttgcatttgcaaaacatttggaattaaaagtgcttctt
ttggatgttgccacccctatgttgatgggctctgaagtggaatttcacatacaccacacg
aaagaggctgcaagagttgtaaagatattgtcattaatagacgcaaagggcaaagtgaca
aaaaagtctcctcgctgtcttcttgcaaagcagagggctgttatagaggtacttttgcaa
gggccagtttgtgtggaagagcatacaaattctaaagctctagggagcgtatctctgagg
gcatcaggaaacactgtcgcccttggtgtagtaagccggattataaaggagcaggagtag
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