Fragaria vesca (woodland strawberry): 105349800
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Entry
105349800 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
105349800
04121 Ubiquitin system [BR:
fve04121
]
105349800
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105349800
Membrane trafficking [BR:
fve04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105349800
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105349800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-rbx1
zf-C3HC4_3
zf-RING_5
zf-Nse
zf-ANAPC11
DUF7129
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
105349800
NCBI-ProteinID:
XP_011458777
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All DBs
Position
LG2
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AA seq
333 aa
AA seq
DB search
MSLSPPRRPRNNSRARPIYQVYWCYQCQRQVRIASTPDPVTCPRCFGQFLAEMDITFRPT
RRFIDYTDLFDTTPEARLLEALSLMLDPPIRGLLDPEPETRRPRPSRRRRHRSFDDEIES
GDPTHPELGTRNRPRTWIIVRPVNDDPIQPLPRSRVTQHPGLPVPRGADPGNYYFGSGLQ
GLIEELTQNDRPGPPPVPEPAINSIPTVKIIEDHLSNDSNCPICMEEFKVGGEARELPCK
HIYHGECIVPWLRLHNSCPVCRVEIPVPTDEESEGSNSGGGGRERRGGRWSRFGSLWPFR
RRYRRIEPHGGNDDGESATSRVANPWWSSCSIL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgagccctcctcgtcgacccagaaacaactcccgcgctagaccaatctatcag
gtctactggtgctaccaatgccaaagacaggtcaggatcgcctccacacctgacccggtc
acctgcccgcgctgcttcgggcagttcctcgccgaaatggacatcacattccgccccact
cgccgcttcatcgactacactgacttattcgacaccaccccagaagcgcgtttgctagaa
gcactttccctcatgctcgacccgcccatccgcggactacttgacccggaacccgaaacc
cgacgtccccgccccagcaggcgtagaaggcaccgcagcttcgatgatgaaatagagagc
ggggacccgacccacccggagctcggtacccggaaccgacccaggacgtggatcatagtc
cgacccgtcaatgacgaccccattcaaccccttcctaggtcaagagttactcaacacccg
ggtttgccggttccacgtggagcggatccagggaactattatttcgggtcggggctccag
ggcctcatagaggagctgacacaaaacgaccgacccggtccgcctcctgtacccgagccg
gcaatcaactcaatcccgaccgttaagattatcgaggaccatttgagtaatgactcgaat
tgtcctatttgcatggaggagtttaaggttggtggtgaggctagggagctcccatgcaag
catatataccatggtgagtgcattgtgccttggctgaggcttcacaattcttgcccggtt
tgccgggtggagattccggtaccgactgatgaggagtcggagggatcgaatagtggggga
ggggggagggaaaggcggggcgggaggtggagcaggttcgggtctttgtggccgtttcgg
aggagatatcgccggattgaaccgcatggtggaaatgatgatggtgaaagtgctacttct
agagttgctaacccatggtggagttcttgctctattctttag
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