Fragaria vesca (woodland strawberry): 105350037
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Entry
105350037 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 10
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105350037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
105350037
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105350037
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
105350037
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
105350037
NCBI-ProteinID:
XP_011459684
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Position
LG2
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AA seq
323 aa
AA seq
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MMKMLQDPATRCGKESVEISRGKDKDRSHDLGGYQYDDEEQGYAEENGDDEDVHIEYEEE
QPNYEPIRDEPINVTLNDPRAFDCPICFEPLTIPVFQCDDNGHIACCNCSSKINICPSCC
SPFGSSRCRAIEKVLESSTISCRNSKYGCNETMTYDKKREHERACMHLPCSYPHSGCEFV
ASYRNLNKHFETNHAGSAIRFSYNRDFPITLKKNEKFIVLQERNEGTLFILKNRLIEGVG
NAVRLTCLQPSFLKRESFYELGASTNGGNLRLLSYTKSSPNHVYDGSPSMANFLLFPVDF
FRSSDQLRMNLCISPNGDQPPIH
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagatgttgcaggatccagccactcggtgcggaaaagagtccgtcgagatttcc
cgtgggaaggacaaagacaggagtcacgatctaggaggatatcaatatgacgatgaagaa
caaggatatgcagaagagaatggtgatgatgaagatgtccatatagaatatgaagaggaa
cagccaaattacgaacccattagagatgaacctattaacgtcaccttaaacgacccacga
gcttttgattgcccaatttgctttgaacctttaaccatcccagtgttccagtgtgatgat
aatgggcacatagcttgctgcaactgcagctccaaaataaacatatgtccatcatgttgt
agcccctttggctctagtcgttgtcgtgccattgagaaggtcctggaatcaagtacaatt
tcatgtcgaaatagcaagtacggctgcaatgaaaccatgacttatgacaagaaaagagaa
catgaaagggcatgcatgcatttgccttgttcctacccccattctggctgcgaatttgtc
gcttcatataggaacttaaacaagcacttcgaaactaatcatgccggttctgcgatccga
ttcagctataaccgtgattttcccattacattgaaaaagaatgagaagtttattgttctt
caagaaagaaatgaaggcacattgtttatcctgaagaatcgcctcatcgaaggtgtaggg
aatgcagtgaggcttacttgtcttcaacctagcttcttgaagagggagtctttctatgaa
cttggtgctagtaccaacggaggtaatctcaggttactgtcctacaccaagagcagtcca
aaccatgtttatgatggctctccttcaatggccaacttccttttattcccagtcgatttt
ttcagatcaagtgatcagctgaggatgaatctatgtatatcgcctaatggagaccagcct
ccaatacattga
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