Fragaria vesca (woodland strawberry): 105350254
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Entry
105350254 CDS
T02666
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03420
Nucleotide excision repair
fve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105350254
09124 Replication and repair
03420 Nucleotide excision repair
105350254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
105350254
03400 DNA repair and recombination proteins [BR:
fve03400
]
105350254
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
105350254
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
105350254
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
105350254
TCR (transcription coupled repair) factors
Cul4-CSA complex
105350254
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105350254
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_AB
Cullin_Nedd8
UN_NPL4
HbrB
KCNQ_channel
Motif
Other DBs
NCBI-GeneID:
105350254
NCBI-ProteinID:
XP_011460204
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All DBs
Position
LG3
Genome browser
AA seq
797 aa
AA seq
DB search
MSLPTKRSSSTTTTSSSSSSSSPLTSPPMKKAKSQSQPDSKNGLFHHHHNSSDNDDDGRR
AQPDNLSRKKAQPPQPGKKQFVIKPFKAKPAVPKNLEEETWEILKSAICAIFEKKPVSCV
LEELYQAVYNLCVHKMGGSLYQRIEKECERHIAAALQSLVGQSPDLVVFLSLVERCWQDL
CAQILMIRDIALYLDRTYVKQTPNVRSLWDMGLQLFRKHLSLSPEVEHKIVTGLLRMIEK
ERLGEAVARTLINHLTKMFIALGMYWESFEKPFLECSSEFYGTEGVKYMQQSDVPEYLKH
VEKRLHEEHERCLLYLDASTRKPLVATAEKQLLELHIPGILDKGFTMLMDGNRIEDLQRM
YTLFLRVNALEALKQALSSYIRKTGQKMIMDEEKDKDMVSSLLEFKASLDTIWEESFSKN
EAFCITIKDAFEHLINLRQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFI
QGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKE
INESFRQSSQARTKLPSGIELSVHVLTSGYWPTYTPMDVRLPHELNVYQDIFKEFYLSKY
SGRRLMWQNSLGHCVLKAEFPKGRKELAVSLFQTVVLMLFNDAEKLSFQDIKDSTSIEDK
ELRRTLQSLACGKVRVLQKLPKGRDVEDNDSFTFNDTFTAPLYRIKVNAIQMKETVEENT
STTERVFQDRQYQIDAAIVRIMKTRKLLSHTILITELFQQLKFPIKPADLKKRIESLIDR
EYLERDKNNPQVYNYLA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgctcctcatcaaccaccaccacctcctcctcttcttcttcc
tcttctcctctcacatctcctccgatgaaaaaggccaagtctcagtcccagcccgactcc
aaaaacggcctcttccaccaccatcacaactcctccgacaacgacgacgacggccgccgc
gcccagcccgacaatttgtcccgcaaaaaggcccagccccctcagcccggcaagaagcag
ttcgtcatcaaacccttcaaagccaaaccggctgtacccaaaaatcttgaagaggaaaca
tgggaaatactgaagtctgccatttgtgctatattcgaaaagaaacccgtttcatgcgtc
ttggaggaactttatcaggctgtttataatctttgtgtgcacaagatgggagggagtctg
tatcagcgaatcgaaaaagagtgcgaaagacacatagcagcggcactgcagtcattggtt
ggccaaagcccagatttggtggtgttcttatcacttgtcgagagatgttggcaggatctc
tgtgctcaaatattgatgatacgcgatatagccctgtatcttgatagaacttatgtgaaa
caaacaccaaatgtgcgttcattgtgggacatgggtttgcaactcttccggaaacatctt
tccctctcaccagaagttgagcacaaaattgtcactggccttttaagaatgattgagaaa
gaaagattaggtgaagctgtggctaggactctcattaaccatctaacgaagatgtttata
gctttaggaatgtattgggagagctttgagaagccatttcttgagtgtagttctgaattt
tatggtaccgaaggagtgaaatacatgcagcaatcagatgttcccgagtacttgaaacat
gttgagaaacggttgcatgaagaacatgaaagatgtttactctacttggatgcaagcaca
agaaagccattggttgcaactgcagaaaagcagcttctagagctccatatacctggcata
ctcgacaaggggttcacgatgctgatggatgggaatcgcattgaggaccttcagaggatg
tacactcttttcttaagagtaaatgctcttgaagcactcaagcaagcccttagctcatac
attaggaagacagggcagaaaatgatcatggatgaagaaaaagataaagacatggtttct
tcgcttttggagtttaaggcttctcttgacactatatgggaagaaagtttttccaagaat
gaagcattttgcatcactataaaggacgcatttgagcatcttataaatctccgccagaat
cgacctgctgagcttattgcaaagtttctggacgagaagcttcgagctgggaacaagggt
acttccgaagaggaacttgagggcacacttgataaagttttggttttatttaggtttata
cagggtaaggatgtgtttgaagcattttacaagaaggatcttgcaaaaagactacttttg
ggaaaaagtgcttctattgatgctgagaagtcgatgatttccaagctgaagaccgagtgt
ggcagtcagtttacaaacaaactcgaaggaatgtttaaggatattgaattgtcgaaagag
ataaatgagtccttcagacagtcgtcccaggccaggacaaaactcccatcagggattgag
ctgagtgttcatgtccttacctcggggtactggccaacatacactcccatggatgtgaga
cttcctcatgagttgaatgtttatcaggatattttcaaagagttttacttgagcaagtac
agcggtaggcgtttaatgtggcaaaattcattaggtcactgtgtgttaaaagcagagttt
cctaaaggcagaaaggagcttgcagtttctctgtttcagactgttgttttgatgcttttt
aatgatgccgagaagctaagctttcaagacattaaggattccactagcattgaagacaag
gaacttcgaagaactctgcagtcacttgcatgtggaaaagttcgcgtcctgcaaaagtta
cccaaaggaagagacgtggaggataacgattcattcacattcaatgatacatttacagct
cctctctaccgtattaaggtaaatgcaatccaaatgaaggaaacagtggaggagaacaca
agcacaactgaaagagtattccaagaccgccaatatcagattgatgctgctattgttcgg
ataatgaaaactaggaagctgctgagtcacacaattctgataactgaacttttccagcag
cttaagttccccataaagccggcagatttgaagaaaaggattgagagcctgattgacagg
gagtacctagaacgggacaagaacaatccacaagtctacaactaccttgcataa
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