Fragaria vesca (woodland strawberry): 105350268
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Entry
105350268 CDS
T02666
Name
(RefSeq) uncharacterized LOC105350268
KO
K14315
nucleoporin NDC1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105350268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
105350268
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105350268
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
105350268
NCBI-ProteinID:
XP_011460235
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Position
LG3
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AA seq
537 aa
AA seq
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MPPPPPPAPPHAVVRNRFLGFLIWQSIPSTLIFLLFKTLSPSSSSKPLFPFAPWFFAVIT
FLSFHLSQLLFSAALSLVSSAHPHPLVSPLNLALELLRFLFVPAASGSPPPGSRARVRVA
AGFAAFLAAAAGSGFLAAVSVCGEVGGWVKGIGRVGFRGFVMGLLYGLYYVYTRKWVLEF
PIIQRPPFFSFKMGIPTAITRSLKLSFVAYIVSAILVVFLPHEFHNKVTIGRWIAEQISF
YIGSFLVFLCWELSHHLHQVLNTKRCIFAPPKGSAAAETNPTEHLLAALEESAPNSLPQY
LAYLDLCMICENNVDSWRRAAFFEESGETYKRVVSVCVRPLEQLASKLGEGLESSVNGKS
QISNQLQSPTDQRLDSKYSEPFDNFQLYAWCAWSAASLTARSNTDDRFGVAQRSGSNAAV
ISTLISCLLAVETYMGKKTTVPAQFMGPASIKWATSSVGNVGMAKKRVGPIHPKAYALAD
ALRNSIYHIVSACHDQMVSSAKTGVLEKYWVIKGEPPFGSHELLVQKLRLFLDFRAS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcctcctcctccggcgccgccgcacgcggtggtccgcaaccgcttcctaggg
ttcctcatctggcaatccatcccctccaccctcattttcctcctcttcaaaaccctctcc
ccctcctcctcctcaaaaccccttttcccattcgccccatggttcttcgccgtaattacc
ttcctgtccttccacctctcccagctcctcttctccgccgccctctccctcgtctcctcc
gcccacccccaccctctcgtctcgcctctcaacctcgccctcgagctcctccgcttcctc
ttcgttcccgccgcctccgggtcgccgccgccgggttctcgggcccgggtccgggtcgcc
gccggtttcgcggcgtttctggccgcggcggcgggttccgggtttctcgcggcggtctcg
gtttgcggggaagtcggtggttgggttaaggggataggtagagtagggtttaggggtttt
gtgatgggcttgctttatgggttgtactatgtgtatacccggaagtgggttctggagttc
cccattattcagcgtccgcccttttttagcttcaagatggggatccccacggctatcaca
cgatccttaaagctgtcctttgtggcatacatagtctcagctattctggtggtgttcctt
ccccatgagtttcacaacaaagttacaattggaaggtggattgcagagcagattagcttc
tacattgggagtttcttggtgtttctctgctgggaactaagtcaccatttacatcaggtg
ctcaataccaagagatgcatatttgcaccgcctaaaggatcagctgcagcagaaacaaat
ccaactgagcatctccttgcagctctggaggagagtgctcctaattctcttcctcaatat
cttgcatatcttgatctctgcatgatctgtgagaataatgttgattcttggcgacgagct
gccttcttcgaagaaagtggtgaaacttacaaaagggttgtatctgtatgcgtgcgacct
ctggagcagcttgcatcaaaattgggtgaaggcttggaaagttctgttaatggaaaatcc
caaatatccaatcagttacagtcaccaactgaccagcgactggattccaaatactctgaa
ccattcgacaatttccagctatatgcatggtgtgcctggtcagctgcttcactgactgca
cgctcaaacacggacgacagatttggggttgcccagagatcgggcagtaatgctgctgtg
atctcaacactgatctcttgccttcttgctgttgaaacatacatgggaaagaagaccact
gtaccggcgcagtttatgggaccagctagtatcaaatgggcaacctcgagtgtgggaaat
gttggcatggctaagaagagagttggccctatccatcccaaagcatatgcccttgctgat
gctctcagaaactcaatctatcatattgtgtccgcatgccatgatcagatggtgagcagt
gccaaaacgggcgtccttgagaagtattgggtcatcaaaggcgagcctccttttgggtca
cacgagcttctggtgcagaaactgcgtcttttcctagactttcgagctagctaa
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