Fragaria vesca (woodland strawberry): 105350465
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Entry
105350465 CDS
T02666
Name
(RefSeq) uncharacterized LOC105350465
KO
K03504
DNA polymerase delta subunit 3
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03030
DNA replication
fve03410
Base excision repair
fve03420
Nucleotide excision repair
fve03430
Mismatch repair
fve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105350465
03410 Base excision repair
105350465
03420 Nucleotide excision repair
105350465
03430 Mismatch repair
105350465
03440 Homologous recombination
105350465
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
105350465
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fve03032
]
105350465
03400 DNA repair and recombination proteins [BR:
fve03400
]
105350465
Protein phosphatases and associated proteins [BR:
fve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105350465
DNA replication proteins [BR:
fve03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
105350465
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
105350465
MMR (mismatch excision repair)
DNA polymerase delta complex
105350465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
Motif
Other DBs
NCBI-GeneID:
105350465
NCBI-ProteinID:
XP_011460802
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All DBs
Position
LG3
Genome browser
AA seq
585 aa
AA seq
DB search
MAQIETQGILQDIETLVSDQLQVVSYKWLSRNYLVSSNDAKRLLQEFVENHGNGLEVVYI
LSGQLKNNPVSYHVRLVSGTQLAEAKEEFDGNFSVGVYSVQPSIPKDPATIWNAEFVQAE
ELHTQAPTVENCLRDNRFCAILNSFVTRNVEGAPLSTAGSLPKTKLSAEPSKVNLAHQGS
VIPKQQQNKEEQSSPRVGLQAPNVVKDVKSESNGIGVTHQPNKPPADKEKVVLPANKKKV
QSDKSSSASGGSLANLWGRASVKSNSNSTAENNNLIPTHTGASADAQICAREAEPGAISD
DDDQDVNFKRASISEVTRKRRVVFDFSDEDECEDAVNLASPECPKGKSYQEDKECSETLV
PHKSNLKFDEQAEDKPEVKEEISVDGESNPPCREDSTVVSKDKISPIILTEKTDRFGPQN
NPNKMDKLATAAKTQRDAGIILTEKKRTSIPENDVNKMDKPTNGASRSPQRRKVLKTRID
ERGREVTEVVWEGKESEAKKADSSTTVKADSSTAKKADSSTAKKADSSTTTKADSTVTSV
TNRPPTAQKSVANTGPKNQTAKAGGKKAVNKDPKQGSIMSFFKKA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaatcgaaacccagggcatactccaggacatcgaaaccctcgtctccgatcag
cttcaagtggtttcttacaaatggctgagtcggaattacttggtgtcgtccaatgatgca
aagaggttgctccaggagtttgtggagaatcatgggaatggtttggaagtggtgtatatt
ttgtctggtcagttgaagaacaatcctgtcagctaccatgtcaggcttgtttcggggact
caacttgcagaagcaaaagaagaatttgatggcaacttctccgttggggtttacagtgtg
caaccttccattccaaaggatccagctacaatatggaatgcggaatttgtgcaggcagag
gagctccatacgcaggctccaacagttgaaaattgcctaagagataacaggttctgcgct
attctcaattcctttgttacgcgtaatgtagagggagcaccattgagcactgcaggttca
ctacccaagaccaaattatctgcagagccatcaaaagttaatttagctcatcaaggtagt
gtgattccaaaacagcaacagaataaagaagaacaatctagtccgagagttggtttgcag
gctcccaatgtggtgaaagatgtcaaaagtgaaagcaatggcataggagttactcatcag
cctaacaaacctcctgctgacaaagaaaaagttgttcttcctgctaacaaaaagaaggtc
cagagtgataaaagctcttctgcttctggaggttcattggcaaatttgtggggacgtgca
tctgtgaagtcaaattcaaattctacagctgaaaataataatttgattcctacacatact
ggtgctagtgcagatgctcagatttgtgctagagaagcagaacctggtgccattagtgat
gacgatgatcaagatgttaattttaaaagagcttccatttctgaagtcactaggaaacga
agggttgtctttgatttctcagatgaagatgaatgtgaagatgcagtcaatttagcatca
ccagagtgtccaaaaggaaaatcatatcaagaggacaaagaatgtagcgaaactttggtt
ccacataaatccaatttgaagtttgacgagcaggcagaagataaaccagaggtcaaggaa
gagatatcagttgacggagaatcgaacccaccttgcagagaagattccacggttgtcagc
aaggacaagatttctccaattatcctgacagagaaaacagatagatttggtcctcaaaat
aatccaaacaaaatggataagctggccactgctgctaagacacagagagatgctgggatt
atcctaacggagaaaaaacgtacctctattcctgaaaatgatgtgaacaaaatggataaa
ccgacgaacggtgcatcaagatctcctcaaagaagaaaagttttgaagactcggattgat
gaacgtggaagagaagtaactgaggtagtatgggagggcaaggagtcagaagcaaagaaa
gctgatagcagtacgacagtgaaagctgacagcagtacagcaaagaaagctgacagcagt
acagcaaagaaagctgacagcagtacaacaacgaaagctgatagtacagttaccagtgtt
accaacaggcctcccacagctcagaagtcagtggcaaatactggtccgaaaaatcaaact
gccaaagcaggaggcaagaaagcagtaaacaaggatcctaagcaaggaagtattatgtca
ttcttcaagaaggcctaa
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