KEGG   Fragaria vesca (woodland strawberry): 105350465
Entry
105350465         CDS       T02666                                 
Name
(RefSeq) uncharacterized LOC105350465
  KO
K03504  DNA polymerase delta subunit 3
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03030  DNA replication
fve03410  Base excision repair
fve03420  Nucleotide excision repair
fve03430  Mismatch repair
fve03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105350465
   03410 Base excision repair
    105350465
   03420 Nucleotide excision repair
    105350465
   03430 Mismatch repair
    105350465
   03440 Homologous recombination
    105350465
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:fve01009]
    105350465
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fve03032]
    105350465
   03400 DNA repair and recombination proteins [BR:fve03400]
    105350465
Protein phosphatases and associated proteins [BR:fve01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105350465
DNA replication proteins [BR:fve03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    105350465
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      105350465
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     105350465
SSDB
Motif
Pfam: CDC27
Other DBs
NCBI-GeneID: 105350465
NCBI-ProteinID: XP_011460802
LinkDB
Position
LG3
AA seq 585 aa
MAQIETQGILQDIETLVSDQLQVVSYKWLSRNYLVSSNDAKRLLQEFVENHGNGLEVVYI
LSGQLKNNPVSYHVRLVSGTQLAEAKEEFDGNFSVGVYSVQPSIPKDPATIWNAEFVQAE
ELHTQAPTVENCLRDNRFCAILNSFVTRNVEGAPLSTAGSLPKTKLSAEPSKVNLAHQGS
VIPKQQQNKEEQSSPRVGLQAPNVVKDVKSESNGIGVTHQPNKPPADKEKVVLPANKKKV
QSDKSSSASGGSLANLWGRASVKSNSNSTAENNNLIPTHTGASADAQICAREAEPGAISD
DDDQDVNFKRASISEVTRKRRVVFDFSDEDECEDAVNLASPECPKGKSYQEDKECSETLV
PHKSNLKFDEQAEDKPEVKEEISVDGESNPPCREDSTVVSKDKISPIILTEKTDRFGPQN
NPNKMDKLATAAKTQRDAGIILTEKKRTSIPENDVNKMDKPTNGASRSPQRRKVLKTRID
ERGREVTEVVWEGKESEAKKADSSTTVKADSSTAKKADSSTAKKADSSTTTKADSTVTSV
TNRPPTAQKSVANTGPKNQTAKAGGKKAVNKDPKQGSIMSFFKKA
NT seq 1758 nt   +upstreamnt  +downstreamnt
atggcccaaatcgaaacccagggcatactccaggacatcgaaaccctcgtctccgatcag
cttcaagtggtttcttacaaatggctgagtcggaattacttggtgtcgtccaatgatgca
aagaggttgctccaggagtttgtggagaatcatgggaatggtttggaagtggtgtatatt
ttgtctggtcagttgaagaacaatcctgtcagctaccatgtcaggcttgtttcggggact
caacttgcagaagcaaaagaagaatttgatggcaacttctccgttggggtttacagtgtg
caaccttccattccaaaggatccagctacaatatggaatgcggaatttgtgcaggcagag
gagctccatacgcaggctccaacagttgaaaattgcctaagagataacaggttctgcgct
attctcaattcctttgttacgcgtaatgtagagggagcaccattgagcactgcaggttca
ctacccaagaccaaattatctgcagagccatcaaaagttaatttagctcatcaaggtagt
gtgattccaaaacagcaacagaataaagaagaacaatctagtccgagagttggtttgcag
gctcccaatgtggtgaaagatgtcaaaagtgaaagcaatggcataggagttactcatcag
cctaacaaacctcctgctgacaaagaaaaagttgttcttcctgctaacaaaaagaaggtc
cagagtgataaaagctcttctgcttctggaggttcattggcaaatttgtggggacgtgca
tctgtgaagtcaaattcaaattctacagctgaaaataataatttgattcctacacatact
ggtgctagtgcagatgctcagatttgtgctagagaagcagaacctggtgccattagtgat
gacgatgatcaagatgttaattttaaaagagcttccatttctgaagtcactaggaaacga
agggttgtctttgatttctcagatgaagatgaatgtgaagatgcagtcaatttagcatca
ccagagtgtccaaaaggaaaatcatatcaagaggacaaagaatgtagcgaaactttggtt
ccacataaatccaatttgaagtttgacgagcaggcagaagataaaccagaggtcaaggaa
gagatatcagttgacggagaatcgaacccaccttgcagagaagattccacggttgtcagc
aaggacaagatttctccaattatcctgacagagaaaacagatagatttggtcctcaaaat
aatccaaacaaaatggataagctggccactgctgctaagacacagagagatgctgggatt
atcctaacggagaaaaaacgtacctctattcctgaaaatgatgtgaacaaaatggataaa
ccgacgaacggtgcatcaagatctcctcaaagaagaaaagttttgaagactcggattgat
gaacgtggaagagaagtaactgaggtagtatgggagggcaaggagtcagaagcaaagaaa
gctgatagcagtacgacagtgaaagctgacagcagtacagcaaagaaagctgacagcagt
acagcaaagaaagctgacagcagtacaacaacgaaagctgatagtacagttaccagtgtt
accaacaggcctcccacagctcagaagtcagtggcaaatactggtccgaaaaatcaaact
gccaaagcaggaggcaagaaagcagtaaacaaggatcctaagcaaggaagtattatgtca
ttcttcaagaaggcctaa

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