Fragaria vesca (woodland strawberry): 105350780
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Entry
105350780 CDS
T02666
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105350780
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
105350780
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105350780
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
105350780
NCBI-ProteinID:
XP_011462008
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Position
LG3
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AA seq
932 aa
AA seq
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MDSGEIPGESIVVSVPSSPGNVEGGIERQDPVTPTPIRKAWVDLVDKCLGTLLTIIQLLC
APLLALFLLVATKWKRVFILSCVAVSIDCLFLYIPIIDQENKCLGSDKRLTNIALVLRSI
TDIAFIFHILLLMANEMDEDPKWDPAKASWLYKKSIYIIVNFLAILPIPQVTEKLGSNGH
CQWIFIVFLFFCFLFSVDLAWEPNLTGAHIPKLATVGIVVGFSRLGGSKHFLKQTIINVF
LIFQYFLRIFQIFLSIKKVGDSVGKLVKGLFNFLLYIIASHVIAAFWYFFSIQRVISCWD
HICRTLRGCKFIYDCGGRTSLNSTSINKLCQIDSPNATLFDFGMYSEILKSGTTGSTKFS
TKFFYYFWWSLKNLSNFGTNLETSSYMWENCFAILISIIGLLLFLILIGNVQTYIQSETE
KSVKIGELRRTRLNTKYKDIETWMLNHGLPDNMKTHMWKNIKENKVVELINKDVDIGFMH
SCYIRDVFNFKSDPLIFICVKELKKISIFRYMDEQDLERFCYPSNWPKYATREKDSYITR
AETELNTLYLIIDGTAEDAQTMRRHDRVGEEVLRWAILNYKKWSVHRDSLPISPVDIKCL
TKIGAFTFTADELIDLCRILGVVHDISKNDDRIKDWLLRNGFPEDLKANIMNCLDQNKLL
GAGKMNADDVDVDFLFGILPEYIKPSIKRHLGMRALKKVPMLRKLHEYALEIICNHLEPV
VYMMNSYVVRAGKPLGFMIFILEGKVIITSSSEITEPSDENVIERGCYYGEQLLSWASPN
NISSSDNPVISTRDVKCPTKVEALILKAEDLKSAASKCGSQWNFNNCMNSQQVVDVGKDR
AANTAPTSTIEEEAIQLHQGHDMILEQLVLIRETIFRRLDDIRSGIRDHGTKLDDQGRRL
DDQGRRLDDMAAFLATVSYTGLTGTSSTPSAL
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggatagcggggagatcccaggagaaagcattgtagtaagtgttccatcttcaccaggc
aatgtggagggtggtattgaaagacaagatccagttactccaactccaattaggaaagca
tgggttgatttagttgacaaatgtctaggaacattgttaactattatacaactcttatgc
gcgcctctattggcactcttcttgctggttgcaacgaagtggaaaagggtattcatacta
tcatgtgttgcagtgtcaattgattgtttgttcctttacattccgatcatcgatcaggaa
aacaagtgccttggctcggacaagaggttgacgaatatagcacttgtcctcagatcaatt
acagatatcgccttcatattccatattttactcctgatggctaatgaaatggatgaagac
cccaaatgggaccccgcgaaagcgtcatggttatataagaagtccatctacatcattgtt
aactttcttgctattcttcccatcccacaggtaacagaaaaacttggctcaaatggtcat
tgccaatggattttcattgtttttttgtttttttgttttttgttttcagttgatttggca
tgggaacccaacctaactggagctcacatccctaaacttgccacagtgggaatagttgtt
ggcttttccagattgggaggttccaaacattttctcaaacaaacaatcataaacgtcttt
cttatcttccaatattttctaaggattttccaaatattcttatccattaagaaggtaggt
gattcggttggaaaattggtcaaaggtttattcaactttctcctgtacatcattgctagc
catgtcattgcagccttctggtatttcttttctattcaacgagtgatatcatgttgggac
catatatgtcgaacgcttagaggatgcaagtttatttatgattgtggtggcagaacttca
ttgaatagcacatccataaacaaattgtgccaaatagactccccaaatgcaacgcttttt
gattttggaatgtatagtgaaattcttaaatctggtactacaggatctacaaaattctca
acaaaattcttttactatttttggtggagcctcaaaaatctaagtaattttggcaccaat
ctcgaaacaagtagctacatgtgggaaaattgcttcgcaattcttatttctattatcggg
ttgctactatttttaattctcattggaaatgtacagacatatatacagtcagaaactgaa
aagtctgtgaagattggagagttgagaagaacgaggcttaatacgaaatacaaggatata
gagacgtggatgttaaatcatggtctcccagataatatgaagactcatatgtggaaaaac
atcaaagagaataaagtagtggagttgattaataaagatgtggatattggattcatgcac
agttgttacatcagagacgtcttcaacttcaaatcagatccgctaatttttatttgcgtg
aaagaactaaagaaaatatccatttttcgatatatggatgaacaagacttggaaaggttc
tgctatcccagtaattggcccaaatatgccactcgagagaaagatagctatatcactcga
gcggaaacagaacttaatactctgtatttgattatagatggcacagctgaagatgcccaa
acaatgcgtcgccacgatcgtgttggagaagaagttctgcgttgggcaatactgaactat
aagaaatggtctgtgcatcgcgattctcttcctatttcaccagtagatattaaatgttta
accaaaataggagctttcacgtttactgccgatgagttgatcgatctttgcagaattttg
ggagttgtccacgatattagcaaaaacgatgatcggatcaaggattggctgttgagaaat
gggttccctgaggatctgaaggcaaacatcatgaattgcctggaccaaaacaagctgcta
ggggcaggaaaaatgaatgctgatgatgttgatgtggattttctattcggtattcttcca
gaatatatcaaaccatccatcaagcgccatctcggtatgcgtgccctaaagaaagtaccc
atgcttcgaaaactgcatgaatacgctttggaaatcatctgcaaccatcttgagccagtg
gtctacatgatgaacagctatgttgttagagcgggaaaaccacttggttttatgatcttc
attctagaagggaaagttataataacaagttcctcagagatcaccgagccatctgatgag
aacgttattgagagaggttgttactatggagaacaacttctgagctgggcatcacccaac
aacatttcttcttctgacaatcccgtcatctcaactagagatgtcaaatgtccaacgaaa
gtggaagccttgattctcaaagccgaggacttgaaaagtgcagcctccaaatgcggatcg
cagtggaacttcaacaattgtatgaattctcagcaggtggttgatgttggcaaagatcgt
gcggctaatacagcaccaacatccactattgaggaggaagctatccagcttcatcagggt
catgacatgattctggagcaactagttctaattagagagaccatattccggagattagac
gacattagatcagggattagagaccacggaacaaaattagatgatcagggacgaagatta
gatgatcagggacgaagattagacgacatggctgcatttttagctacagtgagctataca
ggacttacaggcacatcttctactccttcagcactttga
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