Fragaria vesca (woodland strawberry): 105351527
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Entry
105351527 CDS
T02666
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105351527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
105351527
03036 Chromosome and associated proteins [BR:
fve03036
]
105351527
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105351527
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105351527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
105351527
NCBI-ProteinID:
XP_011464383
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Position
LG5
Genome browser
AA seq
589 aa
AA seq
DB search
MFGQTSSNTSKNPFGSTTKFQFGGQTSTPLWGAPTGSSSSSTGIATFGASSAETSRSFGE
FVTTTQSAPRGNTGFAFGTTSPAFGTSTLPAFGQKFGASSSPFGAQPTNPAFGTSTIPAF
GQKFGASSSPFGDQSTTQSIGNTVSAGGQRQGSRVDAYKSTLEQDLGTVNTCRFQSITAM
PVYESKSLEELRFEDYELGDKGGKTTMKASTPCNTTPSFRFPQTSSSTPATNLIRTPTPA
PPFSSISQPFSNPFSTSNTSPSPFSSISQPFSNPFSTSNTSPSLFPSRTSSQATQTSSSS
PSPSVASSTPATNIFKTPTPTPPFSSISQPFSNPFSTSNSIPPPSSSSSSSPSIVSSTPA
INLFKTPPTPTPPIFSNTQPFSNPFNTTNITPTPFSFPSWTSSQVTSPSPPVTYTFTRPI
PSIPPTQTSISTPAQSPFSTPGSNIVNPTQPQPSNTPVIQQNDLVQQQQQQQQQQQQRQQ
HQQKPVLVVPATNPFGTPRATAQVPHGGTVQYGISSMPVVDRPARARVNVSSLSAARSQI
RRQMIGFPADGCKSRRHDLYKNKNGTSHPKVPFFSDDADQVPKTPKIRL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccaaaccagcagcaacacaagcaagaacccttttggtagcacaaccaaattc
caatttggtggccaaacaagtacacctttatggggagctccaaccggatcatcatcctct
tcaaccggaatcgcaacctttggtgcttcatctgctgaaacaagtagatcttttggtgaa
tttgtaaccacaactcagtcggcgccgagaggcaatactgggtttgcttttggcactaca
agtcctgcttttggcactagtactcttcctgcttttggccaaaaatttggtgcttcgagt
tctccctttggggctcaaccaacaaatcctgcttttggcactagtactattcctgctttt
ggccaaaaatttggtgcttcaagttctccctttggggatcaatcaacaacacaatctatt
ggaaacactgtttctgccggaggccaacgccagggaagtagagtggatgcttacaaatcc
acacttgaacaagacctcgggaccgtgaatacgtgtcggttccagtcaataacagcaatg
ccagtttatgagagcaaaagcttggaggaattacgatttgaagattatgagttgggggat
aaaggcggcaaaactaccatgaaggcaagcaccccttgcaatactacaccatcttttcgc
tttcctcaaacatcttcatcaactccagcaaccaatctcattagaacaccaacacctgca
ccacctttttcttcgatttcacagcctttttcaaatccatttagtacctccaatacttct
ccatctcccttttcttcgatttcacagcctttttcaaatccatttagtacctccaatact
tctccatctctctttccttctcggacttcttctcaagcaactcaaacatcttcctcttcg
ccttcaccatcagttgcttcatcaactccggcaaccaatatctttaaaacaccaactcct
acaccacccttttcttcgatttcacagcctttttcaaatccatttagtacctccaatagt
attcctcctccatcttcttcttcttcgtcttcaccatcaattgtttcatcaaccccagca
atcaatctctttaaaacaccaccaactcctacaccacccattttttcgaatacacaaccg
ttttcaaatcctttcaataccaccaatattactcctactccattttcctttccttcttgg
acttcttcacaagtaactagtccatcacctccagtgacttataccttcacaagacctata
ccttcaattccaccgactcaaacatccattagtactccggctcagtctcctttttctact
cctggctccaacattgtcaatccaacacagccacaaccaagcaacacacctgttattcag
cagaatgacttggtacaacagcaacagcagcagcaacaacaacaacagcagcggcagcag
caccaacaaaaaccagtactagtagtacctgctacaaatccatttggaacccctcgcgca
acggctcaggtgccgcatggtggtactgttcagtatggaatttcaagtatgcctgttgtg
gatagacctgcgagggctcgtgttaatgtctcatctttgtcagctgcaagaagccagata
cgaaggcaaatgattggttttcctgctgacggctgcaaatcaagaagacatgatctttac
aagaataagaatggtactagtcatccgaaggttccttttttcagtgatgatgctgatcaa
gtacccaagactcccaagatcaggctctaa
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