Fragaria vesca (woodland strawberry): 105351989
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Entry
105351989 CDS
T02666
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105351989
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
105351989
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105351989
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
105351989
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Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
ECR1_N_2
CHASE5
Motif
Other DBs
NCBI-GeneID:
105351989
NCBI-ProteinID:
XP_011466024
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Position
LG6
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AA seq
195 aa
AA seq
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MGNDSELVTPGEKLGRASEFKAGRGAYVSPDNLTVYASLTGLRRILSPPPDSPDQRPVVE
VTGHKAHGAIPEPGSIVIARVTKVMARMASADIMCLGTKSVRENFTGIIRLQDIRATEID
KVDMHQSFRPGDIVRAIVLSLGDARAYFLSTAKNELGVISAQSAAGVPMVAISWTEMQCP
ITGQIELRKVAKVGG
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgattcagagttggtgaccccaggcgaaaagctcggaagagcctccgagttt
aaagcaggcagaggcgcctacgtgtcacccgataacctcaccgtctatgcttctctcact
ggcctccgccgcatcctatccccgcctcctgactcacctgaccagagacccgttgtggaa
gtaactggtcacaaggcccatggtgctattccggagcctggatctattgtcattgctaga
gttacaaaagtgatggccagaatggcttctgctgatattatgtgtcttggcacaaagtct
gtgcgggaaaactttactggcataattaggcttcaagatatcagagcaactgagattgat
aaagtggatatgcaccagtcttttcgccctggtgacatcgtcagagctattgtgctatcc
cttggagatgcaagagcttactttctatctactgcaaagaatgagctgggagttatttct
gctcagagtgcagcaggtgtgccaatggtggcaataagttggactgagatgcaatgcccc
attacagggcaaattgagcttagaaaagttgctaaggttggaggataa
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