KEGG   Fragaria vesca (woodland strawberry): 105351989
Entry
105351989         CDS       T02666                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    105351989
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    105351989
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     105351989
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     105351989
SSDB
Motif
Pfam: EXOSC1 ECR1_N S1_RRP4 ECR1_N_2 CHASE5
Other DBs
NCBI-GeneID: 105351989
NCBI-ProteinID: XP_011466024
LinkDB
Position
LG6
AA seq 195 aa
MGNDSELVTPGEKLGRASEFKAGRGAYVSPDNLTVYASLTGLRRILSPPPDSPDQRPVVE
VTGHKAHGAIPEPGSIVIARVTKVMARMASADIMCLGTKSVRENFTGIIRLQDIRATEID
KVDMHQSFRPGDIVRAIVLSLGDARAYFLSTAKNELGVISAQSAAGVPMVAISWTEMQCP
ITGQIELRKVAKVGG
NT seq 588 nt   +upstreamnt  +downstreamnt
atggggaacgattcagagttggtgaccccaggcgaaaagctcggaagagcctccgagttt
aaagcaggcagaggcgcctacgtgtcacccgataacctcaccgtctatgcttctctcact
ggcctccgccgcatcctatccccgcctcctgactcacctgaccagagacccgttgtggaa
gtaactggtcacaaggcccatggtgctattccggagcctggatctattgtcattgctaga
gttacaaaagtgatggccagaatggcttctgctgatattatgtgtcttggcacaaagtct
gtgcgggaaaactttactggcataattaggcttcaagatatcagagcaactgagattgat
aaagtggatatgcaccagtcttttcgccctggtgacatcgtcagagctattgtgctatcc
cttggagatgcaagagcttactttctatctactgcaaagaatgagctgggagttatttct
gctcagagtgcagcaggtgtgccaatggtggcaataagttggactgagatgcaatgcccc
attacagggcaaattgagcttagaaaagttgctaaggttggaggataa

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